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GT14164

CSHL Arabidopsis genetrap mutant lines

Original: GT14164

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14164

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3105979 [Map]; Strand: c
      • AT3G10070.1 - [+] show detail - TBP-associated factor 12
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT14164 - 5-prime edge 
    CTTTATCCCT GCCACAGAGA CAACTCAATC GTCTCTAAGG CCAGCTTCCT 
    CCACAAGTAC CCAATCTCCT GTTGCTCAAG TATGTATTTT TTACCCTTCT 
    GGCCTCTGTA TCTTGACATA GGAACTCCAG CTTTGTGACT CCTTTGTTAA 
    CAACAACTTT GTTTGCACAC TTTAATTCCT TATATTTTAC TTTTGGCAGA 
    ACTTTCAAGG ACATAGCCTT ATGAGACCTT CACCTATTAG CTCTCCTAAT 
    GTCCAATCTA CTGGTGCATC ACAACAAAGC TTGCAAGCTA TCAATCAACC 
    TTGGTTATCA TCTACTCCCC AAGGGAAGCC GCCTTTGCCA CCTCCTTCGT 
    ATAGACCACA AGTAAATTCT CCCTCTATGC AACAAAGACC TCATATTCCT 
    CAGCAACATA TTTCTACGTC AGCAGCAACT CCACAGCCTC AGCAACAACA 
    ATCTCAACAA CAACATCAGC CTCAAGAGCA ACTTCAACAA TTGAGATCTC 
    CGCAGCAGCC TTTAGCTCAC CCACATCAAC CAACC

AT3G10070.1

Model type
Protein coding
Short Description
TBP-associated factor 12
Curator Summary
Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.
Computational Description
TBP-associated factor 12 (TAF12); FUNCTIONS IN: DNA binding, transcription initiation factor activity; INVOLVED IN: transcription initiation; LOCATED IN: chloroplast, transcription factor TFIID complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIID (InterPro:IPR003228), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIID subunit A (TAIR:AT1G17440.2); Has 50598 Blast hits to 32470 proteins in 1374 species: Archae - 31; Bacteria - 3770; Metazoa - 21452; Fungi - 11498; Plants - 4385; Viruses - 864; Other Eukaryotes - 8598 (source: NCBI BLink).
Link
InterPro Scan - TAIR