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GT14151

CSHL Arabidopsis genetrap mutant lines

Original: GT14151

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14151

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108754 [Map]; Strand: c
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -143; Region: promoter
    Flanking Genome Sequence: GT14151 - 3-prime edge 
    GGGTTTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGA TAGAAGAATA 
    AGAAGAAACA GAGAGAGACA TGATTAGAAA CTCCTCTTCC TCTTGAATTT 
    TGACTTTTGA CTTTTCAGTT ATCGCCGGTC TGATATGGCC TTCGTCTTTC 
    ATCTCACTCG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108665 [Map]; Strand: c
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -54; Region: promoter
    Flanking Genome Sequence: GT14151 - 5-prime edge 
    CCGTCAAGTT GGGAAACAAA ACAAAACTCG CAAGTTTAAC AACGCGTCTT 
    CTACCTCCTC CTCATCGGAC TATTTATCTA TAGTCTTCGT TAGATCAATT 
    CCTCTGTTTT ACTCCTAAGT TTCGAGATCC ACATTTCTTT TTAACCTCAT 
    CTCATCTCTT AGTCGAGATC TTCACTTTCT GATGACAAAT AGGGGCGTTT 
    TTTCTCTTTC TCTCTTTATT CTGGCGCAAT TCTCAGGGAA CCCTCATCGA 
    CTATTCTCTG TTCTACCTCC CTTTTTTTCT TTATCATTTT AAAAATCCTA 
    ACATTGAAAA TAAAGTAGTT TAAATAGAGT CAACGAAAAA CATTGTTAAA 
    TG

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR