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GT14146

CSHL Arabidopsis genetrap mutant lines

Original: GT14146

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14146

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT14146 - 5-prime edge
    TTTCATTGTT ATAAGTTTAC TATACTTTTT ATTAGC
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11664292 [Map]; Strand: c
      • AT4G22010.1 - [+] show detail - SKU5 similar 4
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT14146 - 5-prime edge
    ACTTTCTCCC TGACTAGAAT GCTAGATTTT CTGATTTTAA GTCCCAAATG 
    ACAAAATAAA AGTTACTTAA TCCCTACAGA GTAAAAACTA TTTTTGTTCG
    TTTGAGTTGA GACCTTTTCA TTGTTATAAG TTTACTATAC TTTTTATTAG
    CTAACTACAA ACAAAATAAA ATTGTTGTTA ATTAATGAAG TACTTTAGTT
    GCTTTAAATC TTCTATTAAA CAAGCAAATA TTACGTTTTG AATAGCATTA
    AAATCAACGA GAAAAGTTAA CGATCTCAAT TTTTGTTTTA TTCATGAAAA
    AGTATTGTTC TTTGGAAGAG ATGTATCATT TCTTTCTCTT GTAGACTAAT
    ACATAAATAT GCAAGTATTG ATAATGTGTG AGATGAGATT TACTCAAAGC
    ACATTTGTCC GAAAGCTGCA TTCTTTTGGA CAACAAAAAA CAAAAACAAA
    ATTCACAAAA ATTAAAAGTT AAGATCTTAT CCTAATCTTC AATCTTTATT
    GCTTTCTATC CAA

AT4G22010.1

Model type
Protein coding
Short Description
SKU5 similar 4
Computational Description
SKU5 similar 4 (sks4); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 5 (TAIR:AT1G76160.1); Has 5236 Blast hits to 5188 proteins in 961 species: Archae - 4; Bacteria - 1473; Metazoa - 274; Fungi - 2031; Plants - 1319; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
Link
InterPro Scan - TAIR