1. Home
  2. Mutant Lines
  3. GT14046

GT14046

CSHL Arabidopsis genetrap mutant lines

Original: GT14046

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT14046

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23185603 [Map]; Strand: c
    Flanking Genome Sequence: GT14046 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATATACAT TGTCATGAAA 
    CGGCTCCGTT AATTTAGATA TCACTTCCGA TTATTTTTCC CTTTCCCAAA
    AGCGTCTTTT TGTAAAGCAA ACGGCCCAGT GATTGCCATG TGAATCCCCA
    AAACGCCACG TGTCGTCTTC CATGCCAGTA ATACGATTCT GCCCGCTGCC
    TCTTATTACA CGATCTTCAT AATCCGAATT ATTATGCCCA CCCGCTTCCC
    CCATTTATCC GTGGTCGGAT TCCTTCACTA TCCAATTATG TGACCAAATA
    ATCCATACTC TTTTCTACGA AGCCCGATTA TTCTACCCGT TATCTGCGGT
    GAGATCCGAA CTACAATCTT CAAATTCCCT GGGAATCTCC ACAATGATAC
    CGACTAAATC AATCGGATCT CTCTGACAAG CTTCCAT

AT3G62690.1

Model type
Protein coding
Short Description
AtL5
Curator Summary
Encodes a RING-H2 zinc finger protein related to ATL2. The ATL gene family is represented by fifteen sequences that contain, in addition to the RING, a transmembrane domain which is located in most of them towards the N-terminal end.
Computational Description
AtL5 (ATL5); FUNCTIONS IN: zinc ion binding; INVOLVED IN: protein complex assembly; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G47560.1); Has 10661 Blast hits to 10636 proteins in 314 species: Archae - 0; Bacteria - 0; Metazoa - 2642; Fungi - 1094; Plants - 5229; Viruses - 125; Other Eukaryotes - 1571 (source: NCBI BLink).
Link
InterPro Scan - TAIR