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GT13877

CSHL Arabidopsis genetrap mutant lines

Original: GT13877

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13877

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15551051 [Map]; Strand: w
      • AT4G32200.1 - [+] show detail - DNA-binding HORMA family protein
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: GT13877 - 5-prime edge 
    CTTCCTTAAG ATTTCAGGCT TGGCAGGAAG CATATTTGCC TGGGCTGTTG 
    GTTTCTGTCT CTTTTCTGCT CAGATTGGAC ATGTCTTCGT TCAGCCTAAG 
    ACCAGAAGTT CTGAGTCAAA GCCAAAAGTC ACCATGGAAG AACTAGGTAC 
    GTAAAAAATA GATGTTGATT TGGTTTATTT CTGTGTATAT TATGAATCGG 
    AGCATGTGTA TGTTATAAAA TGGTTGTTGA TTTGGACATT TCTTCATGGA 
    AGAAGAGAAG TTGACCCCTC CAAGTTCTGA ACCGAAGTCG GCCCCTCCAA 
    GTTCTGAACC GAAGTCGGCC CCTCCAAGTT CTGAACCACT AGGTACGTAA 
    AAGAATGTTT TTTGTCTCTC TCTTTGTTGA TTTGGTTTAT TTCTGTGAAT 
    ATCTATGAAT CGGAGCATGT GTATGTTATT GCCTAGTTGA ATTTCTGGAG 
    TTGATGATGG TAAAGAGAGA CAAAAAAAGT GGCAGAGAAG TCAAATAAAT 
    CAAAGGAGAA ATCTCCAACG GAGGAGTCTT CTTCAACCAC CCCAAAACCA 
    GAGAAATTGG CTGTTATCAG AAGGATCCTT CCTGAGATAT TTGCTCAACG 
    ATGTGGTCAA AGAAACAGTA GCTTTGAGGC ATTTGCTCAA CGTCGGACGA 
    CATATGATTA TTACAACATC AGGTAATTAG AAAATCATGA TTATTCATTT 
    TGTCTTATAT CTTATAATAG TCACTAATAA ATATCTGATT TTTACAAAAT 
    ATTTTTATGG TGAAAGAAAC ATCTGATGGT AGCAATGAGG GCCTACAACC 
    AACTTCTTCA AGAATCTGGT GGAGCTAGTT GTGTCATGTT TCATGACACT 
    CCTATTTTTA TAAATCTTTC GCGTATTACC TATGTCGCAA AT

AT4G32200.1

Model type
Protein coding
Short Description
DNA-binding HORMA family protein
Curator Summary
meiotic asynaptic mutant 2, homologue of ASY1
Computational Description
ASY2; FUNCTIONS IN: DNA binding; INVOLVED IN: synaptonemal complex assembly; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT1G67370.1); Has 963 Blast hits to 893 proteins in 304 species: Archae - 15; Bacteria - 206; Metazoa - 200; Fungi - 133; Plants - 165; Viruses - 16; Other Eukaryotes - 228 (source: NCBI BLink).
Link
InterPro Scan - TAIR