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GT13600

CSHL Arabidopsis genetrap mutant lines

Original: GT13600

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13600

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15551968 [Map]; Strand: c
      • AT4G32200.1 - [+] show detail - DNA-binding HORMA family protein
        Distance: 0; Region: intron11 (CDS)
    Flanking Genome Sequence: GT13600 - 3-prime edge 
    GGTAGAGGTA TTTTACCGAC CGTTACTTCC CGTTTTCATC CCTAGTTAAC 
    TCATTTGCCA CCTAAGTGTA GTTCGAATTC GAGTTCTATG TGCTCTTGTT 
    GTCACCTGTT GTCTGTGCAA TAATGGGATC CCAACGTCCC CGAGGATGGC 
    CTTGTACGTT ATCAATGGTG CCAGATGACA GTAAAGCGAG GTTCAGTACA 
    AAGTGATCAT TTCCGAATCG ATTCGTATTT CGAACGTATC TGACACGTGT 
    CAAATCGCCG CGTCTGTACG CGCGCGTGAA GCTCAAGAAC CGAAGCGTCT 
    CGGAGGTTTA ATGATGACCT CGTAGGTTTG TCGCCCAATC GCCTCTATTT 
    ATATTAGATT AAACCCTCGG GAAATCATTT TCCGCCGCTT GCAAGAAGAA 
    TCTAAGGTAG CTCTCGCTCT CTCCTCTGCG AATTATTTTG TACTCTCGAT 
    TCTTTATCGA TTTTTCCGGC AATGGGTAAG GTTGTT

AT4G32200.1

Model type
Protein coding
Short Description
DNA-binding HORMA family protein
Curator Summary
meiotic asynaptic mutant 2, homologue of ASY1
Computational Description
ASY2; FUNCTIONS IN: DNA binding; INVOLVED IN: synaptonemal complex assembly; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: DNA-binding HORMA (InterPro:IPR003511); BEST Arabidopsis thaliana protein match is: DNA-binding HORMA family protein (TAIR:AT1G67370.1); Has 963 Blast hits to 893 proteins in 304 species: Archae - 15; Bacteria - 206; Metazoa - 200; Fungi - 133; Plants - 165; Viruses - 16; Other Eukaryotes - 228 (source: NCBI BLink).
Link
InterPro Scan - TAIR