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Mutant Lines
GT13356

GT13356

CSHL Arabidopsis genetrap mutant lines

Original: GT13356

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13356

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 61478 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -2192; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -1932; Region: intergenic

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAATCATA GTAATGTGTT 
TTTTTTTCCT TTTTTTGGTG GTGGCCAAAC CAAAGAAAGG GGTTGCCAAG 
GATCAAAGGA GAGTTAGATT AGGTTTAAAG AAAGGTTTTT GATTAAAGAA 
ATAGGGAAAT TCCTTTACCA ACTTTATATG GGGGAAATGG TTAATTACTT 
CCCGCCAATC TGGGTTTTTT TTTAAACCAA AATATTAATA CCTTGGGCCC 
AAAGGGAAGA AAAAAACCTC CCCATTTTTC CTTTACCCTA ACAAGCCCCG 
GGGGACCCCC AAAAAAAAAT GGACAAATTT TGGCCAAACC AAACAAACCT 
TTTCCCAAAA ACCAAAAAAA AAAGGAACGC CCCGCAACCT TTTTTTTTGG 
GTTATTGGAA AAAAAACTTA AACAGGCATC CCTTAAAAAA AAATAAAGGT 
TGGAAAAAAT AAAAATTTTA GGCGAACTTT TTGGTTCCTC CCCCAAATAA 
GGGAAA

5 prime edge [+] show sequence

Chromosome: 4; Position: 61542 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -2256; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -1868; Region: intergenic

TCTACTTTCT CCCTGACTAT GATCGAATGA CACTCCAAAA TACAGAAGTC 
TCTTAGAGCA TTTCTAACGG AGAAAGTCCC TCCATGGGTG ATGCAACGCA 
TCTTTGCTTT GTTCACGCCT TCGATGGGCC TCGTCGTGAC CAAACCTCTT 
TATTGTTTCT CATTCATGAT TTAGTAGTTT ATGGATTTTA TTAAAGAGAT 
AGGCTTTATA TATTGGGCTT TTAACTTTTT TTAGAATTAA GGTTTTTTTT 
ATGATTCTTA TTTAAAGAAT CCTTACGTTG TAGAATGAAT TAGCTATTGA 
TTATTGAATA AAGAGTTTTA AGAGAGCTTT TGTATAAAGC TTAGAGAGGA 
AGACTCTCAA CCTTAAAAGT TTGTGTTCAA GCCCTGCAAG GATGACTTTT 
TAAACCTCGT CGATATCGCT ACCAATCTCG ACCCTATCCT ATTGCCTCTT 
TGTCAAGTTT TGACGTTCTA AAAAAGATCC GTTCGTAAAT CTGAATTCTC 
CTGAAAATCT TGCGTTTTCG TCTGTTATTT AGCTTCCGCT TTCTATCAGT 
TGGTATCAGA GCCAGGTCGT TCTTGGTGGT TTGATTCCCT TGCCACGATG 
TCTGTGAA

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR