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Mutant Lines
GT13345

GT13345

CSHL Arabidopsis genetrap mutant lines

Original: GT13345

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13345

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 13386 [Map]; Strand: c
- AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -27; Region: promoter
- AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
  Distance: -141; Region: promoter

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTTAAATGCT 
GGGGTTTTAT CGTAGACACG TGACGCGCAC GTGCAAGCTA TTTCCTTGGG 
CTTGGGCTTA GACTCATGAG ATAAAGCAAA TAAAACCCAA ATGGGCTTTT 
TAGAAAAGAA ACCCAAATAA CAGAGTATCT CTTCATCTCA CTCGACCAAC 
ANCNTANCCA TGGAAATTGC AATTTGCAAA CATGGCGCTC GCGCTCTCGC 
TGTCGGCATG TTCTCCTCCA CTCCGCCGCA CTCGTCGTGC CGGTTTTCGA 
ACAAGCTGCT CGATCTTCGC GAATCCAGCA CAGCGAGCCA AGAGGAAGCT 
GCTTGAGCTG ATCTCCGAGG AGGATCGAGG TCTGAGAACC CAGAAAGACC 
CCAAGAAGCG AGATGAAATC GTGAACGCCA TCGAATCCAT GACGGTTATC 
GGGCGCAGCT CCATCACCAC AGACGACTCT CTATCTGCTA CGTGGCGGCT 
CTTGTGGACG A

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 13320 [Map]; Strand: c
  - AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: 0; Region: exon1 (5UTR)
  - AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: -207; Region: promoter
Flanking Genome Sequence: GT13345 - 5-prime edge
```
CCTACTTTCT CCCCGGCGAG CGGCTTTGCC TTGCTCATTC AACCTCGCTC 
GTCGTCGTCG TCGTCTCCAC TTCGATTTTT CAATCAGTAA TATTGGTGGT 
TCAGAGATGA TGATGATGAA TCTTTTAAGG AGATCAGCGA TAGCCATCGG 
CCGCCAATCA AAATCGAAAC TGGCGTCGTT TTCCTCCGCT ACACAACCTT 
GTTCCGGAAT CCCAAAATCG GTAAGGCTTT CGTATTTCA
```

AT4G00026.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00030.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR