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GT13309

CSHL Arabidopsis genetrap mutant lines

Original: GT13309

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13309

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23317275 [Map]; Strand: w
      • AT3G63095.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 1017; Region: intergenic
      • AT3G63110.1 - [+] show detail - isopentenyltransferase 3
        Distance: 801; Region: intergenic
    Flanking Genome Sequence: GT13309 - 5-prime edge 
    CCTACTTTCT CCCGAGACGC CAATCGCACA CGGGCTTAGT AGAGAGAATA 
    AAAAAAATGG ATGGGTTCCA ATTAAGAACG CATTAAGAAA ACTAAGATTG 
    ATATGTGTGT GTGTGTGTGG GCACTCACAT GATGAATCGA ATAATTTGCA 
    CATATTTGTC AACGGGCTTC TCTGTACGGC TTCTGGCGCA TTCTACTGTT 
    TCTTACTGTA CGGTCATTTG CTAATTGCTG CTACTCATTT TTAAAGTATA 
    ATATAATTAA TAACTACTAC TATTATTCTT CTCTTTACCA AAAAAAATAA 
    TATATTAAAT CTTCTTTTTC TTCGTTTTGT TCCGACACAA ACTGGTTAAT 
    ATTTTTGAAC GGATTCTATA CCTAAAAAGT TGCTGCTATA TATTATCAAA 
    CTTTGTGGAT CGTAACATAT GTGTTTTTTT TTTCCCTTTT GGGGGGCCCA 
    AAAATTTGAG AAAAAAACCG CCCCTTTTTT TGGGGGGGTA AAAAAAATT

AT3G63095.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary
Encodes a Protease inhibitor/seed storage/LTP family protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63110.1

Model type
Protein coding
Short Description
isopentenyltransferase 3
Curator Summary
Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.
Computational Description
isopentenyltransferase 3 (IPT3); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 5 (TAIR:AT5G19040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR