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GT13298

CSHL Arabidopsis genetrap mutant lines

Original: GT13298

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13298

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6303539 [Map]; Strand: c
      • AT1G18310.1 - [+] show detail - glycosyl hydrolase family 81 protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G18320.1 - [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 fam...
        Distance: -821; Region: promoter
    Flanking Genome Sequence: GT13298 - 3-prime edge
    AAACGGTAGA GGTATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTAGT 
    TACCGGAGAC AGAGAAGTTA TAAACGGGCT TCCTCTAACG AGGAAAAATC
    TGAGATTAGA GGAAGGGAAA TCAAGAGTAA CGACAAGATC ACTGAACGAA
    GAGATAATAT GAGTTTTCCG GGAACGCGGT CCGGGTCCGT TTGACCCGGA
    AATGATGATG TCTGCGGTAA ACACCTCGTA GAAGAAATCA GAGTTGTGAA
    ACAGAGATGG GTATGAGATA CAGAGAGAGG AGTCCACAGA TTTGATGAGG
    TAAGGATGAA AATATTCAGC TTGGTCACCG TTTTTAAGAG TGAAGTTTTG
    GAAGAAAGAA TTTGTAGGGA GAGGGTTTGA GAGGAGGTCT GGGCTAAAGA
    AACGAGAAGG ATCTGGTAAA ACAGAGGATT TAGTTTCCGG GAAAAGAAAA
    AGAGCGTTCG ATGAAG

AT1G18310.1

Model type
Protein coding
Short Description
glycosyl hydrolase family 81 protein
Computational Description
glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: cell wall macromolecule catabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT5G15870.1); Has 441 Blast hits to 435 proteins in 142 species: Archae - 0; Bacteria - 86; Metazoa - 4; Fungi - 179; Plants - 58; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G18320.1

Model type
Protein coding
Short Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Computational Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT3G10110.1); Has 671 Blast hits to 671 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 261; Fungi - 229; Plants - 123; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
Link
InterPro Scan - TAIR