F17909

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17909

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17909

Determination of introduced cDNA(s)

  • RAFL06-83-H06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-83-H06 - Resource: pda03852

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-83-H06 - full reading 
    GTGTATCAAT GGCTTCCTTC ACCTGTTCTT CTCCATCTTC GATTTTACCT 
    ATTATTGATA CGAGAAGTGG GAATTTGCGA TGCACATTTC AGTCTCAGGT 
    TTCTTGTGGG ATTCAGAGAG ATGATAATGG ACGCCGTGTT TGGCGGAGGA 
    GAACATTGAC GAAGAAGGAC GATATGTTGC GTTACAAAAT GCAAAGAGTT 
    CCATTTGTGG AAGAACAAGT AAGGAAGATA AGAGAAGTTG GGAAGGTAAT 
    GACAATGGAC ATAGAGCAGC TTCTTTTGAG GGAAGACAAT CGGTTTGAAT 
    TTGTCAATAG CGTAGCAGCT GAAGCAACAG AGTACGTGGA CAAGAACAGA 
    GACGAATATG GAGGTTCCAA AAAAGCCATC TTTCATGTTC TAAGCAACCG 
    TGTGAACGAT CTCGGCTTTG ATCGCCCTGA GGCTTATGTA GAAGCTGATC 
    CTTACAAACC CGGTCCTGGC TATTTGTTGG AGTACTACAC TTGATATATT 
    ATAACAAAAA GTGTCAATGT ACTTTACAGC TTTTGTTCTT GTATTACCAA 
    AACCAAATCA ATGCATTCAC AGCTTTGTTG TTTTCAAAAA AATAAAAAAA 
    AAAAAAAAA

    Gene models with high sequence identity

    1. AT5G24314.1 [+] show detail - plastid transcriptionally active7
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G24314.1

    Model type
    Protein coding
    Short Description
    plastid transcriptionally active7
    Computational Description
    plastid transcriptionally active7 (PTAC7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastid chromosome, nucleoid; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR