F17525

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17525

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17525

Determination of introduced cDNA(s)

RAFL05-02-P09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-02-P09 - Resource: pda00767

full reading [+] show sequence

ATCCAAAACG TTTTTCCTTC CCACAGGAAA AGAAGAAAAA CAGACAGCGG 
AGGACTAAAA CAACTAGCCA CAACACAACG CTTCAAATAT ATATTACTCT 
GCCACTTTCT TCAATCTTCC TTCAAAGATT CTTATTACAG CGACACACAA 
CTCTTTTCCA TTTAGATTTT TGATTTTTTT TGGTTCTCTA AAGGAGGAGA 
GAAATGTTGG CTATCTTCCA CGAGGCGTTT GCTCATCCGC CGGAGGAACT 
CAACAGTCCG GCATCTGAGA AATGCTCTAA ACAACCAAAA CTTCCAGAAG 
AAACCCTAAA TGATTTCTTA TTACGTTACC CTCTCAACAC TTTCTCCATG 
TCTTTCGGAC AAGCTGCTGT TCTTGCTTAC GTTCGTCCCT CTGCTTCCTT 
CTCCATCCAC CAGAGGTTGT TTTGTGGATT TGATGACATC TACTGTCTCT 
TCTTTGGGAG CTTGAACAAT CTGTGTCAGC TAAACAAACA GTATGGTCTC 
ACCAAGACAA CAAACGAGGC CATGTTTGTG ATCGAAGCTT ATAGGACTCT 
TAGAGACAGA GGTCCTTATC CAGCTGATCA GGTCGTCAAA GACTTAGACG 
GTAGCTTTTC CTTTGTGGTT TATGATAGCA AAGCCGGCTC TGTCTTCACT 
GCTCTGGGAT CTGATGGAGG GGTGAAGCTA TACTGGGGCA TAGCTGCTGA 
TGGATCTGTT GTTATATCAG ATGATTTGGA TGTTATCAAA GAGGGTTGTG 
CTAAATCTTT TGCTCCATTT CCTACAGGGT GTATGTTCCA TAGTGAAGGA 
GGGTTAATGA GCTTTGAGCA TCCAATGAAC AAGATCAAGG CGATGCCGAG 
GGTAGACAGT GAAGGAGTTC TATGCGGTGC CAACTTCAAG GTGGATGTGT 
ACAATCGTGT TAACAGTATC CCTCGTCGAG GAAGTGAAGC CAATTGGTCT 
CTCTGAATAC TTTTAATAAC ACTTTCAATT TGGTTTCTTT TTCGCACTTG 
TGCTTCTTCT CCGCTTTCAT CTTAGTTATG GACTGTTCCT AAGCTTGCCA 
TGAATAAAAC TGTGAATAAT AAAGCTTTTA ATGTTCTGTT TCTTACTTTA 
AGTCAGACAA TAAACTTTTA ACACTTGTGA TCAT

Gene models with high sequence identity

AT4G27450.1 [+] show detail - Aluminium induced protein with YGL and LRDR motifs
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
superfamily	N-terminal nucleophile aminohydrolases (Ntn h	1.1e-26
HMMPfam	DUF3700	3.9e-51
HMMPfam	DUF3711	2e-33
Gene3D	no description	1.2e-11

See the detailed result >

AT4G27450.1

Model type: Protein coding
Short Description: Aluminium induced protein with YGL and LRDR motifs
Computational Description: Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR