F17426

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F17426

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F17426

Determination of introduced cDNA(s)

  • RAFL06-78-J23 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-78-J23 - Resource: pda03735

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-78-J23 - full reading 
    GGGATCTTCT TCTTCGAACA AATTCGAAAA CAGCACACGG CGATGGCGTC 
    GCTTATACTC GGAGCTCCTC CGCGAGTCAC CGTCGCATTA CCTTCCTCAC 
    GGTTATCATC TTCTCACTCT GAAACTGCCG GTGTCTCTCT CTCTTGCTTC 
    ACTCATCAAT TCTCTCTCTC CACTTCCTCA TCCAGCTCAA TTCCACTCGT 
    GTACTGTGGC AGAGGTGACC GGAAAACAGC TAAAGGAAAG CGTTTCAATC 
    ACTCTTTTGG GAATGCGAGG CCAAGAAACA AGAGCAAAGG AAGAGGACCG 
    GAGAGAGTAC CGGTTCCTCC AGCACCACCG AGGAAAGATA AGTTTGAGAA 
    CGACGAGAAG ATCAAAATCG ATATCGACGA GTCTCTCTTC TCTAATTAGA 
    AATATGAGAT TCTTCACTTG TTGTCTCTCA CTGTAATTTT AATTTGTTTT 
    TTGAAAAGCT TTGATGCTAC GACTCTTTTG TTGTTAAAAA CATCTCCAAA 
    GTTCTCATCT TTTTATGAAA AGTTTGCTTC TTTATG

    Gene models with high sequence identity

    1. AT2G38140.1 [+] show detail - plastid-specific ribosomal protein 4
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G38140.1

    Model type
    Protein coding
    Short Description
    plastid-specific ribosomal protein 4
    Curator Summary
    plastid-specific ribosomal protein 4 (PSRP4) mRNA, complete
    Computational Description
    plastid-specific ribosomal protein 4 (PSRP4); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 87 proteins in 23 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR