F02628

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F02628

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F02628

Determination of introduced cDNA(s)

RAFL09-96-B18 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-96-B18 - Resource: pda10018

full reading [+] show sequence

ATTTTCCGAC GAGGAAAGTT CTTCAAATTC GCTGTTGAAT TTTGTTTCTC 
GGAGAAATTA TCAAAACCCT AGACGATCAC ATTATCGCTT CTGAGATCAA 
AGACGATGCA GCAATTACTG TTCGCTGTTG TTCTCTTCGA GGTTGTTGTG 
ATAATGGCGC TTTCCTTCAA GACGCCGATT AGGAAGCTGT TGATTATGAG 
CTTGGATCGT TCCAAGCGTG GTCGTGGACC GGTGGTGATT CAGACGGTTT 
CTGCGACGGT TATTGTGCTT CTGGTGACGA GCGTGTACAA TATGATGGGG 
ATCCAGAAGC GTTGGATCGA AGATGGTGTA GTGAATCCTA CAGATGAGGT 
TATCATGGCT AAGCATCTCC TTGAATCGAC TCTTATGGGT GGTTTTCTAT 
TCCTTGGGCT AATGATAGAC AGGCTGCATC ATTACATGAG GGAGCTACGC 
ATAAGAAGGA AGAACATGGA AGTTATAAAG AAGGAAGGAG CATTATTGGA 
AGGTGTTAAG GCCAGAGGTT TAGATGAAGT TAAAAACTTG ATGGAAGAAA 
TTACGTCCCT TCGGAAAAGG CAAGAGCAGC TGGACTCTGA GCTTGAGGCA 
AGGTCTAAAG AAATCCGTAC CGAGAAAACT AGTGCGGTTG CTCTACAGAA 
GCAATCTGAA GGGTTCCTTA TTGAGTTTAA CCGGTTGCTT GAGGAAAACC 
AGGTGCTGCG AGACCAATTG CACACTGTGG ATTCGAAACT TTCGCGTTCA 
AGCAGCAAAA AGAATACTTG AGAGACCTTA TTCCAACACT TGAAACTTCT 
TTGCGATTCT GCCGTCTGAA TATATATGTT TCGAGTTTGA TATCAGGAGC 
TTGTGGTTTG GTGTTATCGC ATCTTGTTAA CATGGAAGAT GATTGGGAAA 
GATCAGAGAA TACAAAACAA GTATAGGTTT GCTTCTTGTT TAAGTGTTTA 
GCTAAGGTAG AAATTAATCA ATTCTTCTGC TATAGGAAAC TGTAACTCGT 
TGTAACTTGT TCATTTCGCA ACAAAAACTT CTCGAATTGG TTCTTATTTC 
CTTCCATATA CGTATACAGT CGCTGCAAGT GGGTTGTCA

Gene models with high sequence identity

AT1G11905.1 [+] show detail - B-cell receptor-associated protein 31-like
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	B-cell receptor-associated 31-like	1.8e-06
Coil	coiled-coil	0
HMMPanther	BCR-ASSOCIATED PROTEIN, BAP	2.2e-25
HMMPanther	B-cell receptor-associated 31-like	2.2e-25
HMMPanther	BCR-ASSOCIATED PROTEIN, BAP	2.9e-129
HMMPanther	B-cell receptor-associated 31-like	2.9e-129

See the detailed result >

AT1G11905.1

Model type: Protein coding
Short Description: B-cell receptor-associated protein 31-like
Computational Description: B-cell receptor-associated protein 31-like ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: B-cell receptor-associated 31-like (TAIR:AT5G42570.1); Has 277 Blast hits to 277 proteins in 61 species: Archae - 9; Bacteria - 14; Metazoa - 105; Fungi - 11; Plants - 130; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link: InterPro Scan - TAIR