F02327

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F02327

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F02327

Determination of introduced cDNA(s)

  • RAFL19-86-O07 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL19-86-O07 - Resource: pda11641

    full reading [+] show sequence

    Nucleotide sequence: RAFL19-86-O07 - full reading 
    AATTCGTCGA GAACCGAGTG ACCGTTTCTA GTGCTCACAG AGAGAGAGAG 
    AGAGAGAGAG AGAGAGAGGC GCTGTGGATT TGTGGGAGAG TAGGGACATC 
    AGAGGATTCT TCGATCTTCA GATTCTTACT CGACGAATCC TTAATCGCTC 
    ACCTGCAGTT GTTCTTATCC TCCGCTTATT CCGTCGAGTG CCGTGGCGGC 
    CAATTTCGGC AACTCTGCGC CACTGATGAT TTTGATGGTT AGATCTTTTA 
    ATTGATTCTA AAGAGTGAGA TGTTAAAGCA GACTATAAGA TGGATTTGAT 
    ACTTCATCCA GTAGTAGCTT AAGAAATATT GCGGTTATGT CAGAGTCTCG 
    TCAAAGGCCT CCTTTTAAGG GCCCGAGATG GATTATCACT TTGGTTGTTC 
    TGGTTACGGT TGTTGTCATT ACCGCATTCA TATATCCTCC GCGGAATTCT 
    GTGGCTTGCT ATATGTTTTC TGGTCCTGGA TGTCCTTTAT ACCAGCAGTT 
    TTTGTTTGTA CCTACTCGGG AATTGACTGA CTCTGAAGCT GCTGCTCAAG 
    TTGTCATGAA TGAAATCATG AACCTACCTC AATCTAAGAC AGCAAATCCC 
    AAGTTAGCTT TCATGTTCTT AACTCCAGGG ACGCTGCCTT TTGAGCCTCT 
    CTGGGAAATG TTTTTCCGTG GTCATGAGAA CAAATTTTCA GTTTATGTGC 
    ATGCCTCAAA GAAAAGTCCT GTACATACAA GCAGCTATTT TGTTGGTCGA 
    GATATTCACA GTCACAAGGT TGCTTGGGGT CAGATATCAA TGGTTGATGC 
    AGAAAGAAGG CTATTAGCTC ATGCTCTCGT TGATCCTGAT AATCAACACT 
    TTATATTGCT GTCAGATAGT TGTGTACCGC TATTCGACTT TAACTATATC 
    TATAACCACT TGATCTTCGC GAATCTCAGC TTCATTGATT GTTTTGAGGA 
    TCCTGGACCA CATGGATCTG GTAGGTATTC ACAACATATG CTGCCTGAGG 
    TTGAAAAGAA GGATTTTCGG AAGGGCTCAC AGTGGTTTTC AATGAAGAGG 
    AGACATGCTA TAGTCGTCAT GGCGGACAGC CTTTACTACA CAAAATTCAA 
    GCTTTACTGT AGGCCAAATA TGGAAGGACG CAACTGCTAT GCGGACGAGC 
    ATTATTTTCC AACTCTTTTC AATATGATTG ATCCAGATGG AATAGCAAAC 
    TGGTCGGTCA CACATGTAGA TTGGTCCGAG GGCAAATGGC ATCCGAAGCT 
    GTACAATGCA AGAGACATCA CTCCTTACCT CATCAGGAAA ATCAAGTCCA 
    TCCAACTTGC TTACCATGTC ACAAGCGATT TAAAGAAAGT GACGACAGTA 
    AAGCCGTGTC TATGGAAAGG AGAGCAACGT CCATGTTACC TATTTGCTCG 
    GAAGTTTAAT CCTGAAACTC TAGACCGATT GATGTATCTC TTCCCTAACT 
    ACACCTCGCT GGTTTGAAAG GCTTATCGGA TTCTCGATTG TCCGGTTTGT 
    TCTTTGTTAA GCTCTTACCA AAGCATACAC CTTGTGTGAT AATTATTAGG 
    ACCATTCATA TTGCTGTGAT TCAAAGTTGG GTTTGAGCCT GGCACAGACA 
    AGAACAAGAA CTGCTCTGGT GTTTTTTTGG TTTATGGTTA ACAAAACATT 
    AGCGTGCT

    Gene models with high sequence identity

    1. AT4G31350.1 [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G31350.1

    Model type
    Protein coding
    Short Description
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Computational Description
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT2G19160.1); Has 585 Blast hits to 585 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 553; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR