ET8634

CSHL Arabidopsis genetrap mutant lines

Original: ET8634

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET8634

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11126595 [Map]; Strand: c
      • AT4G20740.1 - [+] show detail - Pentatricopeptide repeat (PPR-like) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET8634 - 5-prime edge 
    CCTACTTTCT AATCAGGCAA TAAGTTTCGC ATTGTAAGCA GCGAAATCGT 
    GTTTATACCC TTTTTGTTTA CCAGCCCAAT GAAAGAACTT AGCCGCGACT 
    GCAGCATCGT TACCTAGTTT CAAAACCTCG GCGACGATAC TTGGTGTGAC 
    GCGGCGGAGT TTGTTTAGCT CGGAGACCAC TGAGGGACCC CAATGGTTAC 
    GGTTCTTACG GAATGCGTCG AGGACGAATC TCGCGATTGG AGATAGACGC 
    TCGGAGGCGG CGGAGATCAC CGTGGAATGT GACGGCGGAG AAGGAGGAGG 
    GAGATGGGTT TCTGGATCCC ATTTGCGGAG ATCGAAAGGT GTTCGGTGAG 
    CGAGGGAGTT GGATTGTGGT TGGGGTGAGA CTCTGGGTAT AGATTGGCGG 
    TTGGAGAAGA GACCACCGTA GACAGTTGGG CGGTTTTGTG ACGGCTTACG 
    GTGTCCGTGG AAGAAATTGG GTTTAAGAGA TTTATCAGAG AGATTCGGAG 
    GTTTTGGTGA TTTCATGTTC TGTTCTTCTT CTTGCTCTG

AT4G20740.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR-like) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G06710.1); Has 37034 Blast hits to 11477 proteins in 267 species: Archae - 10; Bacteria - 18; Metazoa - 245; Fungi - 473; Plants - 35231; Viruses - 0; Other Eukaryotes - 1057 (source: NCBI BLink).
Link
InterPro Scan - TAIR