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ET14411

CSHL Arabidopsis genetrap mutant lines

Original: ET14411

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14411

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5828654 [Map]; Strand: w
      • AT1G17050.1 - [+] show detail - solanesyl diphosphate synthase 2
        Distance: -426; Region: promoter
    Flanking Genome Sequence: ET14411 - 5-prime edge 
    TATTTTGATT CACAATGGAG TTGGAGAAAT GAATTATCAA TATAAAAAAT 
    CATGGTTTCA CGTAATTTGA TGATTTGTTT TTAAAATACT CCCTAGAGCC 
    TAATTATTGT AGGGTAAAAA ACTTATTAGT ATAAAATTTG TGAGATCTGG 
    ATTAATGATA TTATAATTGT CTTGAAACCA GAAAAATGGA TATTCTCTAA 
    TCTCAAAATA TTTGATACGA GTTAGATGAC GGACCAATCG GTAGGAAACA 
    CGTGGTGACA TTTCAGCTTC TGATTACAAC GATGGACTTT TTTTTCCCTC 
    TCTCTCTCTA ATTTGTATAT TGAATTAAAA AAGAAAACGG ACACACACAC 
    ACACACACAA ATGTGAAATC TCTCTCCTCC GCCAAAGGTC GAGTTTTGAG 
    AGCGAGTTCT TACTTCTGAT GTGGTTTTGT CTCCCCCCCC CAAAGAAAAT 
    CAACACAAAA AAAAAGGGGG GGGTTTCCAA AAACAAAAAA ACCCCGGGCC 
    TTTTTTTTTT TTTTTTTTCC AAAAATTTGG CATTACCCCC CCCAATTTTT 
    TTTTTTGGGG GAAAAAAAAA AAAA

AT1G17050.1

Model type
Protein coding
Short Description
solanesyl diphosphate synthase 2
Curator Summary
Encodes a protein with solanesyl diphosphate synthase activity.
Computational Description
solanesyl diphosphate synthase 2 (SPS2); FUNCTIONS IN: trans-octaprenyltranstransferase activity; INVOLVED IN: ubiquinone biosynthetic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Solanesyl diphosphate synthase (InterPro:IPR014120), Polyprenyl synthetase-related (InterPro:IPR017446), Terpenoid synthase (InterPro:IPR008949), Polyprenyl synthetase (InterPro:IPR000092); BEST Arabidopsis thaliana protein match is: solanesyl diphosphate synthase 1 (TAIR:AT1G78510.1); Has 16766 Blast hits to 16738 proteins in 2950 species: Archae - 341; Bacteria - 9538; Metazoa - 427; Fungi - 613; Plants - 416; Viruses - 0; Other Eukaryotes - 5431 (source: NCBI BLink).
Link
InterPro Scan - TAIR