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ET14255

CSHL Arabidopsis genetrap mutant lines

Original: ET14255

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14255

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 101696 [Map]; Strand: c
      • AT4G00232.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -975; Region: promoter
      • AT4G00234.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel prot...
        Distance: 0; Region: exon2 (CDS)
      • AT4G00236.1 - [+] show detail - pseudogene, similar to leaf senescence-associated receptor-like protein kinas...
        Distance: -445; Region: promoter
    Flanking Genome Sequence: ET14255 - 5-prime edge 
    AGATTGAACA GCTACACCAC ATGCTTCAGC AGAAGCCATC AAACCGATAG 
    CGAAAAGACC AACAGATGAT ACTTTGTCTA AAGTCAATAC CTTGTCCCTA 
    TCAAGCCCAC CAAAACTCTT AGCCGACAAC ATTCGGGTAA TCACATTGGT 
    CTTCCACCGA TACAGGAACC ACACAACTGA GAGAATAACC GCTCCCTTCA 
    CAGTCGGGGA AAAGTATTGA GCTGCTATAG TTGTTGGCGC CACCATTGCA 
    GCACTGCAGC ATATCACATT CATCAAGTCT ATCTATTTTC TACAACATAC 
    ATGTCAAAGG AATAAAGCTA GAGAGACTCA CATTTGTGCA AAAGCAATGA 
    AGGTCACCAA GTAACGAGCA GGATCCTCTA AAGCTCCCCA AAAGCTTTTC 
    TCATAAGGAA TGTCTTCATT AGAGAAGCCA ACGGGAAGCA GTTTAGCGGA 
    ACTTTGCATA GCATAAGTGT GAAACCTTCT AAGAATCCTA GGCATCACTA 
    TCCAAGCAAA TAAAGTACCA GTCACAGTGA GACTAACAGG AACTATAACA 
    TCTTTGAGAT ACGGGTTAGA GTCAAGGAAC TGCTGAACAT GAGGAATCAT 
    CTCATCAGAG ACATCTTTAG TCTTCTTGCT ACTCTAAGAA ACAGCATTGA 
    CACTAGTCTG CACCACATCT TTAGCTTTCT CAACCCAATC ATTCCCATTC

AT4G00232.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT5G41765.1); Has 109 Blast hits to 109 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00234.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel protein (TAIR:AT4G00290.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00236.1

Model type
Pseudogene
Computational Description
pseudogene, similar to leaf senescence-associated receptor-like protein kinase, blastp match of 56% identity and 4.7e-52 P-value to GP|9837280|gb|AAG00510.1||AF285172 leaf senescence-associated receptor-like protein kinase {Phaseolus vulgaris}
Link
InterPro Scan - TAIR