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ET14156

CSHL Arabidopsis genetrap mutant lines

Original: ET14156

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14156

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2854188 [Map]; Strand: c
      • AT1G08900.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon10 (CDS)
      • AT1G08900.2 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon10 (CDS)
      • AT1G08900.3 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: ET14156 - 3-prime edge 
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTAAATAA 
    GAGACTTGTT CCATATCGGA AACGCACATT CGTTAATCGT AAGACTCATC 
    TAACATCATT ACACCAATCA TCTTTTATAT AAAGTAAATA TTTGTGCAAC 
    TATATATATG TTATTTTTTT GTTTATTAGT TTCGTTGAAA ATGGTTAGAT 
    TGGATTGGGT TTAATGCTCT TGCAACAATT TTGTGGGAGT GCGGCGATAA 
    GTGCTTATGC TGCTCGAATT TTCGACAAAG CCGGTAAACC AAACAAATCA 
    AGCGCATGTC ACAGCTGGTT TAATATGTTT GTAGTCAACA GCCAATACCA 
    TCTCATGATT TTTAATTATA CTGTTTTGTG TAATTAGGTT TTCCAAGCGA 
    CATAGGAACA ACCATCCTCG CAGTGATTCT GGTACATTAT TCTCTTTGTT 
    ACTCTTTATC ATCTATTTGT CTTTGAATAT TTCATCTTTA TGATTTAATC 
    ACAACTTTTT TCTTTTGTAA AGATACCGCA ATCTATAGTT GTCATGTTAA 
    CCGTTGACCG ATGGGGACGC CGACCACTTC TTATGGTTAT CATTTCACTA 
    TAAAATTCAT TACTGATTTC CTTAGCTAAA TAATATTTTT CAGATTTGAT 
    TATCATTATT GTTTTTTATT TTGCAGATTT CTTCTATCGG AATGTGCATA 
    TGCTCATTTT TTATTGGCCT TTCATACTAC CTTCAGGTTT AGCAAAACTT 
    AACTACTTAA TCGTAGTAAC TAAATTG

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET14156 - 5-prime edge 
    GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2854105 [Map]; Strand: c
      • AT1G08900.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron9 (CDS)
      • AT1G08900.2 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron9 (CDS)
      • AT1G08900.3 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: ET14156 - 5-prime edge 
    CACAAATTCA AGATAATGGT TCTTATTCTT GACAAAAGTC CAATCGAATC 
    AATCTGACCT ATTTTTTGTT AGATTGATTT CAGTTCGGGT TAGTCGGTAA 
    AGGCCAATGT ATGTTTAACT TCTATCACCA TATTAACTTT TATGAATTTT 
    CAACTCAAAT CACTATCAGT TCATTGCCCT TTTTATTTGT TACTTGGGAT 
    TCATCTCACT CGACAATTGA CCATACATCG CCTAATTAAG AGAGGAACAT 
    TAATATGTAA ATCGTGCTTA TAGTACTATA CCAGTAAATT AATTATAAAA 
    TAGTAATAAA ACAACTGAAA GTGTTAAACA TACCAGCCAT CTAGGAGATT 
    CAGGAATAAA AAATAAACAT ATCCCTTGGA AAGCACTTGG GATTGCACCT 
    AGTCGATCGT AGATTGAATA TCAAGAATTA GTCTAGGAAT ATGA

AT1G08900.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 23143 Blast hits to 22654 proteins in 1781 species: Archae - 437; Bacteria - 7818; Metazoa - 5011; Fungi - 6239; Plants - 2470; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08900.2

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 23143 Blast hits to 22654 proteins in 1781 species: Archae - 437; Bacteria - 7818; Metazoa - 5011; Fungi - 6239; Plants - 2470; Viruses - 0; Other Eukaryotes - 1168 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G08900.3

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G08890.1); Has 22743 Blast hits to 22256 proteins in 1748 species: Archae - 444; Bacteria - 7522; Metazoa - 5012; Fungi - 6093; Plants - 2466; Viruses - 0; Other Eukaryotes - 1206 (source: NCBI BLink).
Link
InterPro Scan - TAIR