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ET14130

CSHL Arabidopsis genetrap mutant lines

Original: ET14130

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14130

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1542988 [Map]; Strand: c
      • AT2G04450.1 - [+] show detail - nudix hydrolase homolog 6
        Distance: -332; Region: promoter
    Flanking Genome Sequence: ET14130 - 5-prime edge
    CCTACTTTCT CCCTGAGTTA CACAGCGACT TTGGAACCAA AGAGGCATTT 
    TCACAATCTT GAAGACATTG GTTCGATTTC GCTAAGACTG TTTAAGAACC
    AAACCGAAAT TTTTCCGGTC TAGTCTGGTT TAGTTTTCCA CTGGTTTGGT
    TTTCTGTCAA AAATGTATTT TTTCTGTACT CTAAAATATA CCAATCAATT
    CGTTACTGTA GGGTTTAAAA AAATATATAT ATATCAGACC AAAGAAAAAT
    TTAAAAACAA AATAATTAAG AGTCTTATAC AACAAGTTAG GTTACAGGAG
    AAAAGGAGAA AGAGGGTTAG GTTAAATAGA GAAACACTTT CTCAAAAGAG
    TTGTGAAGAG TGAGGTAGAA CTATGATCAG GCTTTCCTTT GAGAAAGTAC
    GCGTGGTCGG TGCTGCAGTA AAGATAGCTC TCCTTACCAG TTGAATTCTT
    GGTAAGGACA TTGGAGAAAC CTAAGTACT

AT2G04450.1

Model type
Protein coding
Short Description
nudix hydrolase homolog 6
Curator Summary
Encodes a protein with NADH pyrophosphatase activity. Although this protein was also shown to have ADP-ribose diphosphatase activity in vitro, mutant analyses suggest that NUDX6 is involved in NADH metabolism in vivo.
Computational Description
nudix hydrolase homolog 6 (NUDT6); FUNCTIONS IN: hydrolase activity, ADP-ribose diphosphatase activity, NAD or NADH binding, NADH pyrophosphatase activity; INVOLVED IN: response to other organism, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytosol; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: MutT/nudix family protein (TAIR:AT4G12720.3); Has 2998 Blast hits to 2996 proteins in 719 species: Archae - 33; Bacteria - 1649; Metazoa - 236; Fungi - 25; Plants - 166; Viruses - 14; Other Eukaryotes - 875 (source: NCBI BLink).
Link
InterPro Scan - TAIR