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ET14117

CSHL Arabidopsis genetrap mutant lines

Original: ET14117

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14117

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 125204 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron8 (CDS)
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: ET14117 - 5-prime edge
    CCTACTTTAT CCCTGTCTGC TTGTGAGATT GTTTCTATTT TATTTTCCAG 
    AGAAAAAGAA CAGTTATCTG ATTTGTTGTT TGGAGATAGT AAAATTGTCA
    AAATGCCAGA GGCCTCTCCA AAATCCAACA ACGGAATCAA TTCATACAGT
    CACAACATGT GGCCACAACG AAAGATATTA TCAATTACTA CTCTTGCATA
    ATATAGCATA TCAGATTTAA CTAAGAAACA TAGAGACAGC GAAGAGTCAA
    AAGACACAGA AGACTCAGGT TATGCATAAT GATTGACATT AACAACGGTT
    ATTCTTTTAA ACATGTTCAC CCGAAAGAGA AACAGGTACT CGTTATCGTT
    AAGCAAATAC TAGCTTACCT CATAGCAACT TCTAACAGCT TGAGATGACC
    TTCATGTAAT GGGTTAAAAG AGCCAGGTAG TATAATCTTT CTGTCTTCAT
    CAGACCCGTG TGCTTCTGCC ACAAAGTTAG AACTACATCA TTAGTGGCAA
    CAAATGCCAG ATGAAGTTTG AAAAAAAAAA TTCTAAAGTT TCATTGGGAC
    AAATGACCAA AATCTTACCC CCAGAAAATG GATAAATCTT ACAGCACAAG
    TGCCCATTTA TAAGCTGCTC TAGTTCTTGT TCTTCAGAAA AGTGGGTTTC
    AGACTCATAA GGCACCTCAG ACTCGGTCAA GCCAGAGTCA AGTGTCCCAG
    AAACTTGGCA TGCCTTGGCC ATAGCCTA

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR