Home
Mutant Lines
ET14058

ET14058

CSHL Arabidopsis genetrap mutant lines

Original: ET14058

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14058

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 4; Position: 127587 [Map]; Strand: c
- AT4G00300.1 - [+] show detail - fringe-related protein
  Distance: 0; Region: exon2 (CDS)
- AT4G00300.2 - [+] show detail - fringe-related protein
  Distance: -999; Region: promoter

AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAACC 
TAGACGTAGT GGATCCTATA TTCCCAAAAA CAAACCGAGT CAACGCATTA 
AAGAAGCTAA TGATCCCAGC GAAACTCGAT TCAGCGAGTC TTGTCCAACA 
ATCGGTATGC TATGATAAGA GTCATCAGTG GACAATGTCA ATCTCGTGGG 
GATACACAGT TACCTTCACT CGACCATATA TGCCAGCAAG GATGATGGAA 
GTGCCTACTC GCACTTTTAA TGATTGGCAC TTACGTAGCG ATTTCACTAA 
TCTTGCATTC AACACACGTC CGGTAACATG GACGGATTGT CAGCGTCCTC 
GTGTGTTTTA TTTCTCTCAT GCGTTTAGTA ACTCTTCTTC

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 8663247 [Map]; Strand: c
  - AT4G15200.1 - [+] show detail - formin 3
    Distance: 0; Region: exon7 (CDS)
  - AT4G15200.2 - [+] show detail - formin 3
    Distance: 0; Region: exon6 (3UTR)
Flanking Genome Sequence: ET14058 - 5-prime edge
```
AATGGGTGAA GGAAGAAGAA TAGAGAATCA TGGTGTTGGT GAAAAGCTCT 
GCTGATTATT TCCATGGGAA GTCTGCGAAA AACCAAGGAT TACGTTTGTT 
CGCTATAGTG CGCGATTTCT TGATAATGTT GGAGAAAGTT TGCAGAGAAG 
TTAAGGAAAC TACAAAGACG ACGAACCATT CCGGTAAGAA GGAAAGCGAA 
ATGACGACTT CGGACAGTAA TCAACCG
```

AT4G00300.1

Model type: Protein coding
Short Description: fringe-related protein
Computational Description: fringe-related protein; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF604) (TAIR:AT1G01570.1); Has 958 Blast hits to 946 proteins in 99 species: Archae - 0; Bacteria - 2; Metazoa - 87; Fungi - 151; Plants - 707; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00300.2

Model type: Protein coding
Short Description: fringe-related protein
Computational Description: fringe-related protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24010.1).
Link: InterPro Scan - TAIR

AT4G15200.1

Model type: Protein coding
Short Description: formin 3
Curator Summary: Actin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes.
Computational Description: formin 3 (FH3); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology5 (TAIR:AT5G54650.2); Has 4532 Blast hits to 3854 proteins in 397 species: Archae - 0; Bacteria - 318; Metazoa - 1880; Fungi - 396; Plants - 835; Viruses - 88; Other Eukaryotes - 1015 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G15200.2

Model type: Protein coding
Short Description: formin 3
Curator Summary: Actin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes.
Computational Description: formin 3 (FH3); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology5 (TAIR:AT5G54650.2).
Link: InterPro Scan - TAIR