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ET14000

CSHL Arabidopsis genetrap mutant lines

Original: ET14000

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14000

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28605978 [Map]; Strand: w
      • AT1G76240.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: -2049; Region: intergenic
      • AT1G76250.1 - [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomem...
        Distance: 472; Region: intergenic
    Flanking Genome Sequence: ET14000 - 3-prime edge 
    CGGTAGAGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTATTAACC 
    ACTACATCAT CTCTTCCTCT CATTTCCTTC ATACCTTTAA CAGTTTTCTC 
    AGCTTCAATC CTTTTCGTCT CCGCTACAGC TAAAAGCCCT TTGAGCCCCT 
    CAATCTCAGC TCTATAGACA TTATTTTTCT GCTCAAGATC AATGTTCTCC 
    TCACTCGACG AAANNCNNNG NNGAGAAACA TGCTAAACCA TGATGAATAC 
    ACAACGAACA GAACTTCAAA ATGAAAACGA TGGCTCGTCT TTAGGGTTTT 
    ATAGCAAATT TAAACTGTCG GGCAAGCTCT CAACATCCAG TTAGTCAAGT 
    ATATTAATGG TATCATCTCC AAATAAGGAC ATGTCATTAT TATTCATGAC 
    CATCAAACTC AAACTCACCA CAAAAATTTA TAATCAAAAT AATTGGAAAC 
    ATCATGTGGA TCTAAAACAC TTGAATCGAG AAATATCTCT AAAATCCGAT 
    CACAGAGTCT GTGGCTCCTC ACATT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12857335 [Map]; Strand: c
      • AT4G25010.1 - [+] show detail - Nodulin MtN3 family protein
        Distance: -794; Region: promoter
    Flanking Genome Sequence: ET14000 - 5-prime edge 
    TGATGAAAAA ACGAGCAAAC ACGCATGGTT AATGGAACTT AATTCGGTAT 
    GTAACGATTC GGGTTGGAGA TGGAATGGGA ACTAGAACTT TTGCAATCAA 
    TATTTTTGCT CCAGGAGTGT ATTAAATTTA AGTGATACAT GAATTGAATT 
    TTTATTTTTA AAATGAGATG CATTTTTATA AAATATTCTT ATGTTGTGTT 
    TAAAAATTTT TTTTTCTTAG TTATTATCAA CAGTAGAAAA CGTTGAAACG 
    TGTTTATAGT ATATATATTT AACAATGCAA GCTTGGATAG TTTACATAAC 
    GCGCGTAGTT ATATGATGGA AACAAAAAGA TGTAGTTATA TCTTACATGT 
    GTCCGGAGAA CAAATATCTA AACTAATAAA TTAGCTGGTT TGA

AT1G76240.1

Model type
Protein coding
Short Description
Arabidopsis protein of unknown function (DUF241)
Computational Description
Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G76250.1

Model type
Protein coding
Computational Description
unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 74 Blast hits to 74 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G25010.1

Model type
Protein coding
Short Description
Nodulin MtN3 family protein
Computational Description
Nodulin MtN3 family protein; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT5G50800.1); Has 994 Blast hits to 947 proteins in 115 species: Archae - 0; Bacteria - 1; Metazoa - 233; Fungi - 0; Plants - 619; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink).
Link
InterPro Scan - TAIR