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ET13824

CSHL Arabidopsis genetrap mutant lines

Original: ET13824

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13824

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22395250 [Map]; Strand: w
      • AT3G60580.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: 206; Region: intergenic
      • AT3G60590.3 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -2978; Region: intergenic
    Flanking Genome Sequence: ET13824 - 3-prime edge 
    AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT ACTTACTACT 
    AGCTAGAAGT AGCTTTCAAT AACAAAGTAG AAGAAGCCAA GAAGAGTCAA 
    AATTACGCCT TAACACAAAC ATTAAAAGTC TACACTTTCA ATAATAAAGC 
    CAACATTAAT AGTCTATAAA CTAAGTAGAA GCTTATTTGA ATGTTCTTCA 
    ATTTTATGTG GTTAGGCCAA CACGACGTGA GGCCAATACG AAAAAAAGAA 
    TCGGCGTTAG AACATGTAAA AGTAGCCTCC TTTGCATTTA AAATAAAACA 
    TTATCTTTCT TTTTTTTGTC TAGCTCGACC CCAAAAATAA TAATAGTAAA 
    AGAAGAAAAA AAAAAAATTC AAATTTTCCG AAAATTT

AT3G60580.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60590.3

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR