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Mutant Lines
ET13816

ET13816

CSHL Arabidopsis genetrap mutant lines

Original: ET13816

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13816

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 20177 [Map]; Strand: w
  - AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 111; Region: intergenic
  - AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
    Distance: -1260; Region: intergenic
Flanking Genome Sequence: ET13816 - 3-prime edge
```
TTTACCGACC GTTACCTACC GTTTTCATCC CTACTATTGT GTCTACTCCA 
TTTCCACTTT TCACTTATCC TCAGTCACAT AATTAAATTC GTGAAAACGA 
AGGATTATCT ACTGTTCGCA TATTGATCTA CAAAATTTGG AGTTCATTTG 
TGGATGTGGT GGAGACGTGG AGTGATGTTA CTAATTCACT CAAACCTAAC 
CATTATTTAT TTTTCTCTAT CCAATTACGA CCACCTATTT TCTAAAGTAC 
GTAATACGTA TAATATCCAT AATTCATGAG AAGCCTA
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 20250 [Map]; Strand: w
- AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 184; Region: intergenic
- AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
  Distance: -1187; Region: intergenic

TTTATCCCTG CACAATAGCA TATGCTTTGT CTGCAAAATT CCACAATAAT 
TTGTTGATAA TGTTATTGAA TTTATTTATA ATGCTACAAG AAACAAAAAG 
AAAGCGAATG TTTATTTTTT AAAGGTGCTG TAAAATGATT GGGTGTTAAC 
AGGTCAACTT GGCCCCGACC ATTACCACAC GTTTGTGAGT GAACAAGTCA 
TATTATTATT AATAACGAAA AGTGACTCGA AAATTCATGA GAAAAATGCC 
AAACTCAACT ACTCAAGTAA GTATAAGTAT ACTGTTTACA CTATATAGTA 
ATCAATCGTC ACCACAAATT AAGCCCTATA TTTGTCGTTT TACTAATAAA 
CGAACGTACA AATACAATAT ATCACTCAAC TTTGATTTAG TTTGAGATGT 
TGTGTGTACT TAATTACATA AATGAATTTG TGCATGCGAC AAGTATTTTC 
CGACATATCC ATATATTTAC ATTTTCTTG

AT4G00050.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00060.1

Model type: Protein coding
Short Description: Nucleotidyltransferase family protein
Computational Description: maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR