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ET13762

CSHL Arabidopsis genetrap mutant lines

Original: ET13762

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13762

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24667922 [Map]; Strand: w
      • AT5G61350.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -51; Region: promoter
    Flanking Genome Sequence: ET13762 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCACTG GTGGTGGAGG AGGAAGGAGA 
    GAATTAGAGG TTTAGCATAA TCAAAAACGA ATGGTTTTTA AAGTTTTGAA 
    CAAAAACTAC TTAAAAACTT GCGGCCGGTT ATACGATTTA CGATATTTGT 
    TTTATTGATC TTTTAATTTA TTAATGTTTG AGAATTGTTT TGTTGGAAGC 
    ACGTTAAAGG GAGCAACGTG CAAAAGTGTA AGAAATATTT TTTGTTTTCT 
    TTGGAAGATG AGAATTGATT TTTTTTAGTC AAAAGCTTAA TTAATTTTGT 
    GGATAGGTTT CTTTGAGTTT ACTTGTTACA AATTAGAAAA ATAAAGACAG 
    TGAGGTACTA AATTGGTGGG CAGTTAAAGA TTTCAAACTC TTATCCTCCA 
    TTAACGATAA CTATAGTTTT TTCAGTGTTT AGAAATGTCT TCCCCCCCCC

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24786951 [Map]; Strand: c
      • AT5G61680.1 - [+] show detail - Pectin lyase-like superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: ET13762 - 5-prime edge 
    CCTACTTTCT CCCTGCTCTG TACCTCGTAC CTACCTAATT AGATCTCTTG 
    CTCCATAGTG TATATATACA ATAACGATGA TCATTAACGT TAATCGTTTT 
    GTATGTTAAT GAAAATAGGG TACACAACTA AACGTTGTGG GAGATGGAAT 
    CAGAGTGATC ACAGCTCATG CGGGAAAAAG CGCTGCAGAG AAAAGCGGAT 
    ACTCGTTCGT CCACTGCAAG GTTACAGGGA CTGGAACCGG GATCTACTTG 
    GGTCGATCAT GGATGAGCCA CCCCAAGGTT GTTTATGCAT ACACGGATAT 
    GTCAAGTGTT GTGAACCCAT CTGGATGGCA AGAAAACCGC GAGGCCGGAC 
    GTGACAAGTA TGTATAGTCC AAAGTCCAAA CCATAGTATA TCAATCAAAA 
    ACTATGTGAC ATAAGTTTTA ATGTAAAATG CACTGATTGA TGAGCAGGAC 
    GGTGTTCTAT GGAGAATATA AGTGCACAGG AACAGGATCG CACAAGGAGA 
    AGAGAGTAAA GTATACACAA GACATTGATG ACAT

AT5G61350.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT4G39110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61680.1

Model type
Protein coding
Short Description
Pectin lyase-like superfamily protein
Computational Description
Pectin lyase-like superfamily protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G69940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR