1. Home
  2. Mutant Lines
  3. ET13701

ET13701

CSHL Arabidopsis genetrap mutant lines

Original: ET13701

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13701

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 34135 [Map]; Strand: w
      • AT4G00090.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13701 - 3-prime edge 
    TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC TAGTTAAAGG 
    CGGTGTTTCT AGAGCTTAGC TTATGGAGAG GAGAGTGATC TCCGCATACA 
    CGTAACCGGG TCGGGTCGGG TTTGTAACTA CTTCTAATTT TATTAGAAAA 
    TATGGGCCTT AACCTCACTG ATCCATTAAT TTGAAAGCCC ATTTTAAAAT 
    TCAGCTCTTT ACAAAAATAG AAAGAAAAAA AGGCCCACCG TTGGTGTTCG 
    AACCCATTAA TTTCAAAGCC CATTTATAAC TTCATCTCAC TCGAC

AT4G00090.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: periodic tryptophan protein 2 (TAIR:AT1G15440.2); Has 19942 Blast hits to 11235 proteins in 520 species: Archae - 42; Bacteria - 5638; Metazoa - 5982; Fungi - 4099; Plants - 1742; Viruses - 0; Other Eukaryotes - 2439 (source: NCBI BLink).
Link
InterPro Scan - TAIR