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ET13637

CSHL Arabidopsis genetrap mutant lines

Original: ET13637

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13637

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3108112 [Map]; Strand: w
      • AT3G10080.1 - [+] show detail - RmlC-like cupins superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13637 - 5-prime edge 
    GTCACAGGTT TTGGTATGCA GAAGTCTTGG ATGGGATCAG GGTCGGAAGC 
    TAATGTGAAG CATACATTAA AACAAAGAAG ACAAAGAGCT TTTAGAAGAA 
    ACAAAGTGTT TGCTTCCATT TTACTTGAGG TCCATGTGAA GAAGAGTTGT 
    GTTACATCCG GTTTAAATAA GCATATGTAT ATCTGGTGGG GGTAAATGAG 
    AGACTGGTTA AGATGGTTAC TTTTTATCAA CCAAAATTTC GTCTGTGAAA 
    TTAAGGTGTG GGTTTTTGTA CCAAATGAAA AACCACGTTT GGATATGTGG 
    TTTTGGTTAT GGGAGTGGTT AGGCCGGTAC ATTGACTGAT AAACCCCTTT 
    TGTGGCTCGA TTGACACATC TCTTATGAAT TTACTA

AT3G10080.1

Model type
Protein coding
Short Description
RmlC-like cupins superfamily protein
Computational Description
RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT1G18980.1); Has 1595 Blast hits to 1591 proteins in 125 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 57; Plants - 1448; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).
Link
InterPro Scan - TAIR