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ET13607

CSHL Arabidopsis genetrap mutant lines

Original: ET13607

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13607

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 97717 [Map]; Strand: c
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: -1062; Region: intergenic
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: -2932; Region: intergenic
    Flanking Genome Sequence: ET13607 - 5-prime edge
    CTTTATCCCT GCTTCGGGGT GAATATGCAT GTGAACTGTA TGAAGACGCG 
    TTTTGGGGTT TATCGTTTAA AAATCATTAG ATATGTGACT GACCAAAGTG
    TTAATCAAAG ATCTGCACCA ACACCTTTTA CATATACTAT ATTCTAATAC
    GTAGAGGCAG CGTAGAACAC TCTAGAAGAA GTACTAGGTG AATTATGATC
    GATATGCCAT TCATCTGAGA GCAGAGAATG GAACTTTACG CATGTTTAAT
    TAAAACAACT TTCAAACTTG TCTTAAAATA TGAAAATTAC TAGTTCCTAC
    TCTGATTAAG ATAAGATTGG CATTATATTC ATATTCTTGT ACCTAATATA
    TAATTGAAGC ACTTGAACAT ATTTAGTCAT ATAGTCTTGA ATTTTGTTGT
    TGTTTTTCCC TTTTTTTGTG GGGTCAAACT GAGTTGCTGT AAATTTGAAC
    ATACATATGA ATATGCATTT AAATTGTGGC CAACAGTTTT AGAAAACTGT
    TATCAAATCA AAGATACTTT AAAAATACAA AAAAGTAGTG TAAGATACAA
    GAAAGAAAAA GTTGCCACTT TCTCATGTCG CATATATATA ACGTTTCTCG
    GAACTTGCAT TTTCTCTCTT CTTGTTTACA CATTCCTCGC CTGTTACGAG
    TAACACAATA TTTGGACTTA TTGGATGGTT GCCTTAATA

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR