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ET13570

CSHL Arabidopsis genetrap mutant lines

Original: ET13570

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13570

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11135289 [Map]; Strand: c
      • AT4G20790.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13570 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTGGATCTGA 
    TAGATAACAA ATACCTTCTA CAACTCCTAG AACTACTCTT AACCTTCTTC 
    TCCATGATAA AGCCATTGAC GAACTTAACC AAGTCTCAAC ATTTTCACCT 
    TGAATCCATT CTGTAACCAA AGCTCTCATG TTTCTACTAT TACACCAACC 
    CAACACTCTT ACCAAGTTCT TGTGTCGTAA CTTAAAAACC ATCTCGCATA 
    CCTCTGCGAA TTCACGCCTT TTCTCACTCG AAACCTTCTC TTTATAAACC 
    TCGAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11135191 [Map]; Strand: c
      • AT4G20790.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET13570 - 5-prime edge 
    TTTGATCTCA CCACAAGCAG TGTTTTGTTA TCCGATGATA ATCAAGAACC 
    TTTGATTTCT CATTTCAAGA TTGGAGATAG AAACAACTTG TCAACAAGTA 
    AGGCTTCATC TTCTTCTTGC AAAAATCAAA ACCTTTTTAA GGCTATAAAA 
    GCTAAGTCTG TTGTTGCTGT TGTTGTTGTT GTGTTATTAC AGATATATTC 
    AACTTTGGAT TGTTTTTTGT GGAGATGATT ACAAATCTAA GACCTGATTT 
    GGGACAAGAA GATTCACAAA GAAGGTATCT TGAGTATATA AGAGCTCATT 
    ATCCGGATAA TCTACAGAGA GTGATTGATG AGAAGATGA

AT4G20790.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G23950.1); Has 22866 Blast hits to 21354 proteins in 341 species: Archae - 0; Bacteria - 11; Metazoa - 712; Fungi - 3; Plants - 21851; Viruses - 23; Other Eukaryotes - 266 (source: NCBI BLink).
Link
InterPro Scan - TAIR