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Mutant Lines
ET13386

ET13386

CSHL Arabidopsis genetrap mutant lines

Original: ET13386

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13386

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 26259028 [Map]; Strand: w
- AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
  Distance: 0; Region: exon1 (5UTR)

CGGTAGAGGT ATTTATCATG GTCTTATAAA TCTGAAGCTC TTTGTGTGAG 
AGTTTGAAAT CAAATCGGAA AAAAAAGAAG AAGAGGAAAA ACAAAAGAGA 
GAGAGATAGT GAAATGTATC GGCCTAGACT ATACCACTTC TGGTATTTAA 
TTTCTTCTTT ATTTCGTTTT ATATAGAAAG GCTGAGAGAG AGAGAGAGAG 
GACATATGAT CTAAGAAGAG AAAGAGACGC TCTCAATTGA TTCTCTCGTT 
AAAAAAATAA AAATAACACG ATCAAATACA AGCTTAAACT TCATTTACGT 
TAAGCCAAAG TATATATAGT TTAACTCCAG TTTTATCTCT CTCNACCTCG 
ACAAAGGGAA AACCCTGGCG TTACCCAACT TAATCGCCTT GCAGCACATC 
CCCCTTTCGC CAGCTGGCGT AATAGCGAAG AGGCCCGCAC CGATCGCCCT 
TCCCAACAGT TGCGCAGCCT GAATGGCGCC CGCTCCTTTC GCTTTCTTCC 
CTT

5 prime edge [+] show sequence

Chromosome: 3; Position: 4693043 [Map]; Strand: w
- AT3G14150.1 - [+] show detail - Aldolase-type TIM barrel family protein
  Distance: -42; Region: promoter
- AT3G14150.2 - [+] show detail - Aldolase-type TIM barrel family protein
  Distance: -62; Region: promoter
- AT3G14160.1 - [+] show detail - 2-oxoglutarate-dependent dioxygenase family protein
  Distance: -318; Region: promoter

ATGTCAGGCT AACTTTTTCA AGTCTCTAGT AAATGAAACC GAATAAGATA 
AGGGAAGTCA AACACTGTCT GTCGGGGAAA TAATTCTTGA TCTTGATCTT 
TACGGGCCCG GTCGATGACA AAATACGACA AAATCTACTC TTGTCGCTTT 
TGTAAGATGT AAATATGTAA TGACACAGTA CTACTCTACT AACTCGCATA 
GCCTGTCGTT ACAGAAAAGG ATTTCAGCCC ATGGGCTTTA CTATGATAAA 
TTCATCAGCC CAAAATAATT CGGACACATC TGAACCACGT GTCAGCTTAT 
ACAACGATGA CCTGGCATGC TGAGTCAGCA CCGCCAAAGA TGGTGCACGA 
CGACCGGAGA GTTTTTACTA ACTTGTACAC GAAATTGGGT CAGAAACCCA 
AGAGTCTCTC TTGCACAAAA AACTGTCTGT AAAAGGGAGT GGGCATCATC 
GTTGACGCTT CAGTTGTAGT ACTTTAACCT GCTAAAGTTA CAGTCTTTTC 
AAAAGAGCCT GCGAGTGAAA TCGATGAATC ACAGCGAAGC TAGGGGTTCC 
GGTGGCCATA AGGGTTATCG GGGACGTTCT CAAGCATCTG AGCAATGGGT 
TCCGGTACTT ATACTTGATT GTCGTCTCGT ATTCTTGG

AT1G69780.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper protein family
Curator Summary: Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description: ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G14150.1

Model type: Protein coding
Short Description: Aldolase-type TIM barrel family protein
Computational Description: Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14130.1); Has 14086 Blast hits to 14066 proteins in 2250 species: Archae - 261; Bacteria - 6825; Metazoa - 476; Fungi - 830; Plants - 349; Viruses - 0; Other Eukaryotes - 5345 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G14150.2

Model type: Protein coding
Short Description: Aldolase-type TIM barrel family protein
Computational Description: Aldolase-type TIM barrel family protein; FUNCTIONS IN: glycolate oxidase activity, oxidoreductase activity, FMN binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), FMN-dependent alpha-hydroxy acid dehydrogenase, active site (InterPro:IPR008259), FMN-dependent dehydrogenase (InterPro:IPR000262), Alpha-hydroxy acid dehydrogenase, FMN-dependent (InterPro:IPR012133); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT3G14130.1); Has 14086 Blast hits to 14066 proteins in 2250 species: Archae - 261; Bacteria - 6825; Metazoa - 476; Fungi - 830; Plants - 349; Viruses - 0; Other Eukaryotes - 5345 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G14160.1

Model type: Protein coding
Short Description: 2-oxoglutarate-dependent dioxygenase family protein
Computational Description: 2-oxoglutarate-dependent dioxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate-dependent dioxygenase family protein (TAIR:AT3G14140.1); Has 1267 Blast hits to 1266 proteins in 595 species: Archae - 0; Bacteria - 933; Metazoa - 94; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 101 (source: NCBI BLink).
Link: InterPro Scan - TAIR