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ET13328

CSHL Arabidopsis genetrap mutant lines

Original: ET13328

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13328

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26259020 [Map]; Strand: c
      • AT1G69780.1 - [+] show detail - Homeobox-leucine zipper protein family
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13328 - 5-prime edge
    CTTTATCCCT GGTCTTAAAG CCATTATCAT GGTCTTATAA ATCTGAAGCT 
    CTTTGTGTGA GAGTTTGAAA TCAAATGGAA AAAAAAGAAG AAGAGGAAAA
    ACAAAAGAGA GAGAGATAGT GAAATGTATC GGCCTAGACT ATACCACTTC
    TGGTATTTAA TTTCTTCTTT ATTTCGTTTT ATATAGAAAG GCTGAGAGAG
    AGAGAGAGAG GACATATGAG CTAAGAAGAG AAAGAGACGC ACTCAATTGA
    TTCTCTCGTT AAAAAAATAA AAATAACACG ATCAAATACA AGCTTAAACT
    TCATTTACGT TAAGCCAAAG TATATATAGT TTAACTCCAG TTTTATCTT

AT1G69780.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper protein family
Curator Summary
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Computational Description
ATHB13; FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cotyledon morphogenesis, regulation of transcription, DNA-dependent, response to sucrose stimulus, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 23 (TAIR:AT1G26960.1); Has 11763 Blast hits to 11710 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9272; Fungi - 193; Plants - 2061; Viruses - 5; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR