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ET13303

CSHL Arabidopsis genetrap mutant lines

Original: ET13303

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13303

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22395092 [Map]; Strand: w
      • AT3G60580.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: 48; Region: intergenic
      • AT3G60590.3 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -3136; Region: intergenic
    Flanking Genome Sequence: ET13303 - 3-prime edge 
    AATGAAACGG TAGAGGATTT TACCGAACCG TTACCGACCG TTTTCATCCC 
    TAGTTAGGCC AACACGACGT GAGGCCAATA CGAAAAAAAG AATCGGCGTT 
    AGAACATGTA AAAGTAGCCT CCTTTGCATT TAAAATAAAA CATTATCTTT 
    CTTTTTTTTG TCTAGCTCGA CCCCAAAAAT AATAATAGTA AAAGAAGAAA 
    AAAAAAGGAT TCAAATTTTA CAAAAATTGG GACGACCCAA ATCCCGCAAA 
    GTTGGTAACC TTAATTCGGC TTTCTTGGAA ACCCCACAAA AATTTCGTTT 
    TTTTCGGTGG GGGCGGGAAA ATAAAAATCT ATCTTCCTCG GTTTCACAAA 
    CTCGTTTCAA TGAACTCAAC GTGGTGGATT CCCAAAAAAA TTCCCAACCC 
    CGGGAAATCT TTGGGGACCT CCAAGGGTTG GCCCCAAGGC AAAAATTCTT 
    AAACAAATCG GACATTCTGG GATTCTCTTA CCACCACCAC CAACTTTATC 
    AAACCCGGTT CCCCTCCGTG GCCCGGTTTG GTGGTAACTA ACCCGGTCCT 
    CCTAAGGACT GGCCCAAGGC CCACCAAAGG TTGGATAAAA TTGGAACATT 
    TTCCCGAAGG CCCCACACTG GAACCTCCCT T

AT3G60580.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G45120.1); Has 2639 Blast hits to 2349 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 1624; Fungi - 13; Plants - 935; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G60590.3

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR