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ET13012

CSHL Arabidopsis genetrap mutant lines

Original: ET13012

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13012

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18020431 [Map]; Strand: c
      • AT4G38530.1 - [+] show detail - phospholipase C1
        Distance: -243; Region: promoter
    Flanking Genome Sequence: ET13012 - 3-prime edge
    AAGTGGTCTC TTTTATTTGC ACCGCAAAAA GCCAGTATAT ATCCCCATTA 
    GAAAAGACGT GACAAAGTGT TTAATAGATC CTTTATGTTT TCCTCGGACC
    CATGCATATA TAAGTGTATT TAAATCTTTT ATAAGGTTTT TATAGCCATA
    AATAAACATA TTTAGTTCAA AATATGAATA ATTAAGTAAT TGGAATAGCG
    AGACACGTTC CTTGAGATGA TAACACGAGC ATATATTCTT CATCACTTTT
    GTTTGCTTCA CATCATATAC GCTAACTTAT GTGTGTGTGT AATATATGCT
    CTCAGA

AT4G38530.1

Model type
Protein coding
Short Description
phospholipase C1
Curator Summary
Encodes a putative phosphoinositide-specific phospholipase C. There are two genes called ATPLC1, one corresponding to AT4g38530 (this one) and one corresponding to AT5g58670.
Computational Description
phospholipase C1 (PLC1); FUNCTIONS IN: phospholipase C activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711); BEST Arabidopsis thaliana protein match is: phospholipase C1 (TAIR:AT5G58670.1); Has 2562 Blast hits to 1935 proteins in 260 species: Archae - 0; Bacteria - 0; Metazoa - 1702; Fungi - 403; Plants - 251; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link
InterPro Scan - TAIR