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ET12940

CSHL Arabidopsis genetrap mutant lines

Original: ET12940

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12940

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 368806 [Map]; Strand: w
      • AT2G01830.2 - [+] show detail - CHASE domain containing histidine kinase protein
        Distance: -724; Region: promoter
      • AT2G01830.3 - [+] show detail - CHASE domain containing histidine kinase protein
        Distance: 0; Region: intron2 (5UTR)
    Flanking Genome Sequence: ET12940 - 5-prime edge
    CCTACTTTCT AACTCACCAA CTTCTAGAAT TTATTATCTA TTTTTTCCTT 
    GGTATAAATA AGTTTTCTGA ACTTTAGAAA TAAAACGTTT TGTTTTGTTT
    TTTTACTTAC ACCAAAAGGA AAATAAAACG TTTTTTTGTT GAAATATAAG
    AAAACAAAAA ATATAGGTGA GTGAGAGACT TTGTACGAGA GTCGCTATCG
    CATATCTTTG GCGATAATGA CATCGCGACA AAGCGCAGAT CTGGCCCCAT
    AGGCCTTTTA CCTGAAATAC CCACCATTCT AGTCTCTTAA CTACGAAAAT
    ACCCCGGTTA AATGGGCCTG ACTCATAAGC CCATGATTTA TCCACGTGTA
    ATTCTTAAGA CAATTGCATG AGTTGATTCA GGAGATTTTA GAATTCAAAA
    TTTATGAATA ACAATCAAAT TATTTATTCA CTACTAGTAT TATACGGTAA
    ACTATTTTTT ATATTATTTA GAGTGTTTCT TTTTTTTGTA ATAGCAAATT
    GTTATGACCT AACCACAAAT TTAAAATGCT CATGAATTTC TAAAAACGTT
    AAAAACAAAA AATCATTAAA TTATTACATG TTTGAGGCAA TAGTAAATCA
    ATCCCATTAA ATTAGTACCA TATTAAATGA TAACATAGTT ATGAGTTTTA
    TAATGAAAAA TACAGAAAAA AACATAGGGC TATTATTAAA GATACATGAA
    AA

AT2G01830.2

Model type
Protein coding
Short Description
CHASE domain containing histidine kinase protein
Curator Summary
Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane
Computational Description
WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 134660 Blast hits to 108037 proteins in 2975 species: Archae - 759; Bacteria - 119664; Metazoa - 32; Fungi - 2267; Plants - 2388; Viruses - 27; Other Eukaryotes - 9523 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01830.3

Model type
Protein coding
Short Description
CHASE domain containing histidine kinase protein
Curator Summary
Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane
Computational Description
WOODEN LEG (WOL); FUNCTIONS IN: osmosensor activity, cytokine binding, cytokinin receptor activity, protein histidine kinase activity, phosphoprotein phosphatase activity; INVOLVED IN: in 7 processes; LOCATED IN: membrane; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CHASE (InterPro:IPR006189), Signal transduction histidine kinase, core (InterPro:IPR005467), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: histidine kinase 2 (TAIR:AT5G35750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR