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Mutant Lines
ET12922

ET12922

CSHL Arabidopsis genetrap mutant lines

Original: ET12922

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12922

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 18442958 [Map]; Strand: c
  - AT4G39756.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: 0; Region: intron1 (3UTR)
  - AT4G39760.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
    Distance: -721; Region: promoter
Flanking Genome Sequence: ET12922 - 3-prime edge
```
TATTTTACCG ACCGTTACCG ACCGTTACTT GTTTCAGTCA TTCTCTTTAA 
ACCATCTCTC AGTTTTTTTT TTTTTTTTT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 18442949 [Map]; Strand: c
- AT4G39756.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: 0; Region: intron1 (3UTR)
- AT4G39760.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -730; Region: promoter

CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTACTTG TTTCAGTCAT 
TCTCTTTAAA CCATCTCTCA GTTTTTTTTT TTTTTTTTAA ATTTCCTTTA 
ACCATTTTTT TTTTTTTTTT TTTTACCCTT TACCTTTTTA CCTTTGGGAA 
CCCCCCCTTT AAAAATTGGG GGTTTTACCC CGGATTTAAA AGTTTAAAGT 
TGGACCGCCC CCCGGAATTT TAAAAAAAAA ATTTTTGGGC CAAATTTAAT 
TGGGGGACAA AACCAATGGG GAATTCCCCC AAAGTAGGGC CAAAAAACCC 
CAAAAATCCC CCCCAACGGG AAGCCCAAAA AAACTTTTTT CCCCCTGGGA 
AGGGGGGAAC TTTCCTTTGG CTTCCTTTAA AAAAAAAACC GGGTGGCAAT 
TTATTTTCCG AATCCCCCAA AAAAAAAAAA ACTTTTCCAA ATTT

AT4G39756.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G28160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39760.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT4G39756.1); Has 990 Blast hits to 963 proteins in 43 species: Archae - 0; Bacteria - 15; Metazoa - 33; Fungi - 0; Plants - 942; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR