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Mutant Lines
ET12819

ET12819

CSHL Arabidopsis genetrap mutant lines

Original: ET12819

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12819

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 1955576 [Map]; Strand: w
- AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
  Distance: 0; Region: intron3 (CDS)

TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
AACCTGTCTA ATTGTGAATA ATCTTGTTTT TAACTCTGTA TCCCGCATTT 
GTTTATTGTA GATACTTGGT CCCACGAGAC ATGACTGTTG GACATTTCAT 
CCATATGCTA AGCAAAAGGA TGCAGTTAGA TCCATCCAAA GCTCTCTTTG 
TTTTCGTACA CAACACTCTT CCTCAAACCG GTAAGATAAG AAGTATCATC 
ATCCATGTAG AGTGAGACTT TACCTGCAGT TTTCCAAAGC TTTCCATTAA 
CACTTGTCTT GAATTATGCA GCTAGTCGCA TGGACTCTCT CTACAATACT 
TTCAAGGAAG AAGACGGGTT CTTGTACATG TGCTACAGCA CCGAGAAAAC 
TTTCGGCTAA CAAAAGATTT GTCGCTTCAT ATCGAAATCG AAGCGCACTC 
TGAATAATCC ATTTGTTTGA TTCTTATGTT TGTGAATAAC GTCAGCTCTT 
GTTGTTACTG TTATTGTTGT TGTTAGCTGA CATTGTACAG AAAAGCTAAA 
AAAAAGAAAG ACATTTGACT TTGTAAATT

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 1955621 [Map]; Strand: w
  - AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
    Distance: 0; Region: intron3 (CDS)
Flanking Genome Sequence: ET12819 - 5-prime edge
```
TCCATCCTAC TTTCATCCCT GGACAGGTTA CACTTGGTTT GGTCCAACAG 
CTAAATTGAT GTCACAACTC ACTTGTTCTT CTCC
```

5 prime edge [+] show sequence

Chromosome: 3; Position: 1955646 [Map]; Strand: w
- AT3G06420.1 - [+] show detail - Ubiquitin-like superfamily protein
  Distance: 0; Region: exon3 (CDS)

GGTTACACTT GAGTTTGGTC CAACAGCTAA ATTGATGTCA CAACTCACTT 
GTTCTTCTCC ATGTATGACA GATCTGCGTT TGAATATTTC TCAATGATCA 
CCTACATAAG TAAATAAAAC CCATCCATAA ATGCTGGAAT CTGATGAAGA 
AACCAAACCA AGAACAGATC CAAATCCCTA AATCAAATTG GTTTGGGTTG 
TTGTTGGTGA TAGATCAAAT CTCAACTAAA GAAGTCGTCT CCGACATTGA 
CCAGAGTGAT TGGATCAACA CCAAACCGCA CAAAATCAGT CAAATTTCAG 
ATCCCAGATC GTATCCATCA AACCATGGCG AAGAAATTCT AAGATTGAAA 
CAGAGATTCT AGCAAATTCG AGAGATGCAA GTCAAACGAA GACTTTTTTT 
TAATTGAGTA AATCATTCGA ACCCTAAGGA AATCCACAAT CGCACGGCAA 
CTAAGACGGA AACACCAAGA AACAAATCAA ACATGAAATT TATGAAATAA 
CTTACAGGTA TTCTATCTGG ATATTTCGCA ATGATGTTGT TCGACTCCTT 
CAATCTCTCA TCTATATCCT CAAACAAAGA TGAAAACTTT GCTTCAGAAG 
CACATTTCGA AGGAAAAAAA ATTCCAAAGA ATCAGAAAGA GATTAACGAA 
GAACAAACCA GAGGAGAATT GATCCT

AT3G06420.1

Model type: Protein coding
Short Description: Ubiquitin-like superfamily protein
Computational Description: autophagy 8h (ATG8H); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G15580.1); Has 1476 Blast hits to 1474 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 722; Fungi - 178; Plants - 301; Viruses - 3; Other Eukaryotes - 272 (source: NCBI BLink).
Link: InterPro Scan - TAIR