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ET12757

CSHL Arabidopsis genetrap mutant lines

Original: ET12757

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET12757

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22528551 [Map]; Strand: w
      • AT3G60950.1 - [+] show detail - C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
        Distance: 0; Region: intron16 (CDS)
    2. Chromosome: 3; Position: 22589732 [Map]; Strand: w
      • AT3G61030.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: intron15 (CDS)
    Flanking Genome Sequence: ET12757 - 3-prime edge 
    ATGAAACGGT AGAGGTTTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTTCTGAGAC TTTCATTCTA AATCAAATGG ATCAAGCTTA AAAACTACTA 
    AATGGAAGCA AGCTCGTGCC TTTTCTCGAT ATGATACATA AAACAGAAAA 
    ATGAGTGTTC TTGGTGTGCA GTTACATACC AGGTAAAATT GTTGTCCATA 
    TGAAGTCGTA AAGTTGAGAT AAGTTCTTGT TTGCGTCCTT TCACAGGGAG 
    CCCAACTTTT CTATAACCAA AACAATTGTA ACACAAATAC AAAAATGTCC 
    CACATGTTTA AACAATGAAC AAGAATCTGG ATGTCCACAG AAACAATAAC 
    AAAGCAGCAA GAGAAACGAA AAGAGTATAG ACTTGCCTCA ATGTGACTCT 
    TAAGTTCTTG AACCGTCATT GCCTCAATTT C

AT3G60950.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase
Computational Description
C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT3G61030.1); Has 4425 Blast hits to 4326 proteins in 1442 species: Archae - 111; Bacteria - 2322; Metazoa - 578; Fungi - 318; Plants - 452; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G61030.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1); Has 4067 Blast hits to 3968 proteins in 1320 species: Archae - 109; Bacteria - 2078; Metazoa - 577; Fungi - 310; Plants - 450; Viruses - 0; Other Eukaryotes - 543 (source: NCBI BLink).
Link
InterPro Scan - TAIR