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54-5050-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24668385 [Map]; Strand: c
      • AT5G61350.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-5050-1 - 5-prime edge 
    GANAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCAGGAC GGTGGTGTCG GTGGTGACGG AGAAGACGGA 
    GTTTGTTAGA TTGTAGAGAG GATGATTGAG AGGATAAAAA TGGAGACGGA 
    TCCAGTGACG ACCAGGTCGT GAAATGTAGA AGGAGTAAGT TGATTTTCCG 
    GCGAAGATTC TAGCGGTTAA GTATAAGGGA AGGGTACTGG CATTAGAGTC 
    GGTGATCGGA ATTGAGTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24668437 [Map]; Strand: c
      • AT5G61350.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-5050-1 - 3-prime edge 
    TTCCTNAGGN NCNATTTCTA CGCCGGNTAT ACTTTTTCTA TCGNCTNCAA 
    AGAATNNNNA CTCTNCNCCG NNTAGANACT CCTNTCTTTA NNATCNAACC 
    ACATANAGGN TNCACCGNNT TTATNAACGC CGTTGAAATC GTNTCTGTTC 
    CGGACGANCA TTGTTCCGGG ACTCTGCNTC CTCTGTTCCT CANGCTCCTG 
    ATTTCAAAGG CTTAAGAAGC TNCTCTCTTG AGATCCTTCA TNGGATAAAT 
    ATCGGAGGAG ATTTGATTTC TCCGAAGATA GATCCTCTCT CACGCACTTG 
    GCTCTCTGAT AAACCTTACA ATACGTTCCC TGAAGGTTCG AGAAATGTCA 
    CTGTTGATCC TAGTACGATT ACTTATCCAG ACGGTGGAGC TACGGCGTTG 
    ATCGCTCCTA ATCCGGTTTA CGCCACCGCG GAGGAAATGG CCGATGCACA 
    AACCTCGCAA CCTAATTTCA ATCTCTCATG GAGAATGAGT GTTGATTTTG 
    GTCATGATTA CTTCATTAGG TTACATTTTT GTGACATTGN AAGCAAATCG 
    CTTAACGACC TTATCTTCAA TGTTTTCATC AACAAGCTCT CTGCAATCTC 
    TGCACTTGAC CTCTCCTCAC TAACCAGCGC TTTAGGTACA GCCGTATTAC 
    GCGGATTTCG TGCTTAATGC GTCTACGATC ACCAATGGGT TCGATCTTGG 
    NTCAAGGTTG GTCCGACTCC GAATCTTCAT TCGGGTAAAC CNA

AT5G61350.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT4G39110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR