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Mutant Lines
54-4520-1

54-4520-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 16484100 [Map]; Strand: w
- AT4G34480.1 - [+] show detail - O-Glycosyl hydrolases family 17 protein
  Distance: -105; Region: promoter

CTNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTACGTCTTG TGCTTGTTTT TCCACACTAC ACGTGTTGAC 
TTCTGTTCAC AAGTCTTGAG CTTAAGTCTT CGTTTCGGTC TTTATTTTGT 
AATTTTATAC TTTTGATTTT TCTCGTCATC TAATTTGGAA ACTGAAAAGT 
GCTATTTCTG GAGAGGAAAT CTTTTGGAGA ATCGAAAAGA GAGCATTTGT 
TTTTTGAGTT TGCTTTTGAA GCATGAGGTA TTCCATAGGA TGATTAGTAT 
CGCAAAACAC ATATTTCAGT GTGTAAATAC ACCATTTGTT CGTTTCCATG 
CTATTTCTCA GTAGTCCAAG TTAAACATTC TTCAAAGTTT CACCCACAAC 
CACCAATAAT TTTAGCTTTC GTGATTCCAC AATGTACAAC TCACAATTAT 
TATGTTGACT GTGGTCACAT CATATACAAA ACAAAACCAA AGAAAAAGGT 
TAAATAAATA ACTGCATATT CCAAAAACAG GATTGCAACT TTTTCTATCC 
ATGATAAGTA TGATTTGTGC ACAACGTCAT CAGCAAGGAC TCGGGACAAG 
CCCACAAGTA AAAACAAAAG AAACGAGAAA CCCAAATCCA AATCCAAAAC 
CCCAAGGACG AACAAGACAC AAGATGATCA GATCACACAA AAAAATCAAA 
AACCCACAAC CTCCAAACCC AAAATTGGGG GATAGAGACA AAAGAAAAAC 
CACCAAACAA ACAACAG

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 15213048 [Map]; Strand: c
  - AT4G31350.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Distance: 0; Region: intron1 (5UTR)
  - AT4G31350.2 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Distance: 0; Region: intron1 (5UTR)
Flanking Genome Sequence: 54-4520-1 - 3-prime edge
```
TATCTGTATA CAAGGTCTCA CTGGTTAATG TTTCTTCTCT TACTTCTGTT 
CAGTGATTCT AAAGAGTGAG ATGTTAAAGC AGACTATAAG ATGGATTTGA 
TACTTCATCC AGTAGTAGCT TAAGAAATAT TGCGGTTATG TCAGAGTCTC 
GTCAAAGGCC TCCTTTTAAG GGCCCGAGAT GGATTATCAC TTTGGTTGTT 
CTGGTTACGG TTGTTGTCAT TACCGCATTC ATATATCCTC CGCGGAATT
```

AT4G31350.1

Model type: Protein coding
Short Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT2G19160.1); Has 585 Blast hits to 585 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 553; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G31350.2

Model type: Protein coding
Short Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT2G19160.1); Has 585 Blast hits to 585 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 553; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34480.1

Model type: Protein coding
Short Description: O-Glycosyl hydrolases family 17 protein
Computational Description: O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT2G16230.1); Has 576 Blast hits to 566 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 570; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR