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Mutant Lines
54-4352-1

54-4352-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 3154883 [Map]; Strand: w
- AT1G09730.1 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: -503; Region: promoter
- AT1G09730.2 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: -503; Region: promoter
- AT1G09740.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
  Distance: 0; Region: intron1 (CDS)

CTCGTTACTA CTAATTTTGT GATTGTTTAA TGTATATATG ATCTCGACCA 
TGTGGTGTTT GACTCTGGGA ATTTTGCGAT TAAGGTGGTC TTGAGGTTCC 
TGCTTTCACT GCTGCAATCG AGCAACACCA GAAGCNGGAT CACCGACACC 
ATCCTCGAAC ACGCTAGTCA AATTTGTGCT GAAAAATCTG TGAGTAGAGT 
TATTTCCCTT GTGTCCCCTG TGAGAATGGG ATATTTTACC TCATAGTCCA 
GATCTAGTAG TGTAATTCTA TAAGTTTTAT GGATTAGAAT ATTTCTCTTT 
CACTGATGGA TTAGAATCTG GAGCAATTAC TTATCTGTTA TCTATAGAAG 
TGTATATTGA TTTGAGGGTG GTCATTCATG AGCAAGTTGT GATGGTTTAC 
TCTCAGGTGA ATGTGAAAAC ACAAGTGGTT ATTGGGGATC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 3154767 [Map]; Strand: w
  - AT1G09730.1 - [+] show detail - Cysteine proteinases superfamily protein
    Distance: -387; Region: promoter
  - AT1G09730.2 - [+] show detail - Cysteine proteinases superfamily protein
    Distance: -387; Region: promoter
  - AT1G09740.1 - [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-4352-1 - 3-prime edge
```
GTAACGAGAC TCAACTGGGA CCACCGAAAG GTATGGTGCC GGGACTCACG 
CCGGCGGCTA CAGAAGGCGA CGGCTGGACG TGGAGCACGA CGAATGATGA 
ATCGGAAGAA GACGAAGAGA GCTTGAGGTT GTCTAGAGCC CACCTCAGAG 
CTTCCATACT CACCTCGCTT CCATCTACCG CCACAACAAC GCAATTCAAG 
CTNCCATCCC GGGCCNNAAN CCCANCGGGC CCTTTAAGTC NGTTGCTTTT 
AACCAAGATA CTNTTCTTAT AGCNGTGGGA ATTACCATGC CGGGCNGNTT 
ATNATNCTTG CTCATATACA TGAGATCAAG TCATATACGA CTCCAAAACA 
CTAACCAACC TTCTTCTTGC TTCTCAAAGC T
```

AT1G09730.1

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1); Has 1713 Blast hits to 1567 proteins in 224 species: Archae - 4; Bacteria - 15; Metazoa - 815; Fungi - 324; Plants - 268; Viruses - 7; Other Eukaryotes - 280 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G09730.2

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1).
Link: InterPro Scan - TAIR

AT1G09740.1

Model type: Protein coding
Short Description: Adenine nucleotide alpha hydrolases-like superfamily protein
Computational Description: Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 5950 Blast hits to 5719 proteins in 1218 species: Archae - 487; Bacteria - 4382; Metazoa - 139; Fungi - 81; Plants - 701; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink).
Link: InterPro Scan - TAIR