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54-4138-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26462136 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon4 (CDS)
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon4 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -449; Region: promoter
    Flanking Genome Sequence: 54-4138-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTG TACGGGTCTT TTTTGTTCAT CAGCTTAGAT 
    AATCTCTCAG CGAGGCTCTT CCTTGTCGCA GGGGATACAC CATTCTTCCC 
    TATCATCGAC TCAAGAACTG CCTCACCCAA CAACTTTATT CTTGATAACC 
    GCTTTTCCAG TTTTCGGGAC TCTCTCCTCT TTCGAAAATG CAATCTGCAT 
    CACAAGTTGT CAAAAGATCT CGATCATTCA TTCGACCAAT ATTATTCGAA 
    ATGATAATCC GAAAAATAAA GTTGACTCAC TGTGAGAGAG CCTTTAGGAC 
    AGATAGCGAA GATGATTGAA GAGCCGGGAG GGAAATCTTG GTTTTTGAAG 
    ACCATCAAGA ATTGGTCAAT GGCTTTGGCT TCGGATCTTG TGTATTTCCC 
    TGACGCTTTC ATGATCTCCT CACAGTATTC TACTACTTTC TCTGAGTATC 
    GTATCCCCGT TAACCTCTTT TTCATCGTCA CCCTTGCCAA TTTCTCAAAC 
    TCACCTTTTC CCACAAGAGA AGAACAAAAA AAATTGTAAT ATATGACGTG 
    TTTAAGTTGA ACATGTAATA ACTACAAAAA TCGTGTGAAG TGTGAACGAG 
    ATAGAAAAGT GTTTTAATTA AATTAGCACG TAATAAAGTG TACACCACCT 
    GTGACGAGTT GACTGAAGAA AGGGACGGAT TCCGTCAACT CCTTTGCATT 
    CTTGCCTTTN CACTTAGCGG GAGATTGACN GCAGTGCCAT GGC

AT5G66220.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 378 Blast hits to 377 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR