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Mutant Lines
54-3968-1

54-3968-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 61818 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -2532; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -1592; Region: intergenic

GAAAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
CATCCTACTT TCATCGACTC TCAACCTTAA AAGCTTGTGT TCAAACCTTG 
CAAGGATGAC TTTTTAAACC TCGTCGATGT CGCTACCGAT CTCGACCCTA 
TCCTATTGCC TCTTTGTCAA GTTTTGACGT TCTAAAAAAG ATCCGTTCGT 
GAATCTGAAT TCTCCTGAAA ATCTTGCGTT TTTGTCTGTT ATTTAGCTTC 
CGCTTTCTAT CAGTTGGTAT CAGAGCCACG TCGTTCCTGG TGGTTTGATT 
CCCTTGCAGC GATGTCTGTG AAAGACATGA GATGAGCGAC CAATTTTAAG 
TTTGATATTT CCAAGCTCCA TGGTGGAATC TCTAGTGATT CGTTACTAGA 
TTGGCTTGTG AAGATTGAAG AAATTTTGGA GTTTCAAAAC GTTTCGGATG 
ATCTATTTGT TTCGCTTGTG ATTAAGAAAT TTTGAGGGCA AGCCGCATCA 
TGGTGGCAAC AAAAGCAGAA AACACGCAAG CGAGCTGGCA AGAATCCTAT 
TAAATCATGG GATAAACTTA AGGAGAAGCT ATGCAAAACT TTTTTACCTC 
CTCATTACAC GAGTTCGGTG TCTAATCGTT TGAAGAATGT GAAACAAAGA 
GCCGGATTTG GGGATGATTT CACGAGGAAT TGTCACGTTC ATGTCAACAA 
TTTCGTGGAG AAGCCTACTT ATGATCGAGA TTGNTACGTT CAAGACAACG 
ACTTTGTCGA TAAACCTGNC CATGG

3 prime edge [+] show sequence

Chromosome: 4; Position: 61776 [Map]; Strand: w
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: -2490; Region: intergenic
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: -1634; Region: intergenic

GAAAACGGTA GAGGTAATAC CTCTCTAGGC TTTATACAAA GCTCTCTTAA 
AACTCTTTAT TCAATAATCA ATAGCTAATT CATTCTACAA CGTAAGGTAA 
GAATCATAAA CAAAACCTTA ATTCTTAAAA GAAGTTAAAA GCCCAATAGG 
TAAAGCCTAT CTCTTTAATA AAATCCATAA ACTACTAAAT CATGAATGAG 
AAACAATAAA GAGGTTTGGT CACGACGAGG CCCATCGAAG GCGTGAACAA 
AGCAAAGATG CGTTGCATCA CCCATGGAGG GACTTTCTCC GTTAGAAATG 
CTCTAAGAGA CTTCTGTATT TTGGAGTGTC ATTCGATCAT AGTAATTTTT 
TTTTTTTTTT TTTNGGGGGG GGNAAAAAAA AAAAAGGGGG NGGCNANGNN 
NAAANNNNNN NTNANNTTTT TTTANGGNAA NNNTTTTTNN TAAAAAAAAA 
NGGGAANNNN NTTCCCNNCT TTTTTTNGGG GGNANNGGNA ANNNCNNCCC 
CCCCNNCNGG GGTTTTTTTT TTAAAAAAAA AANNNNNNNN CCNGGGNCNA 
AANNNAAAAA AAAAANTTTT TTTTTTTTTT TTTTTNNTTT NACCCCCCNG 
GGGNCCCCCA AAAAAAAANG GANAANTTTN GGGAAAANNA ANNAAAANNN 
NCCCCCAAAA TTTNAANAAA ANNGNNCCCC CCCCNTTTTT TNTTTGGGGG 
CCNNGNNCNA ANCCCTAANC NGGGNNNCCN NNAAAAAAAA ANTGNGGNGG 
GNAAA

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR