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54-3930-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58428 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3930-1 - 5-prime edge 
    GTGGGGATAA CAGAGCAGCT GGTTAAGGCA GCAGAGGTCA TAGAGAGCGA 
    CACAGTGTCT AGCTCAGGGG ATATTGGCGC GGCTCAATCA ACAGCTCTCT 
    TCTCCCGTCG GGAAGCCATT AGAAAGAGCA GCTTTTTACT TCAAAGAAGC 
    TCTCAATAAT CTCCTTCACA ACGTCTCCCA AACCCTAAAC CCTTATTCCC 
    TCATCTTCAA GATCGCTGCT TACAAATCCT TCTCAGAGAT CTCTCCCGTT 
    CTTCAGTTCG CCAACTTTAC CTCCAACCAA GCCCTCTTAG AGTCCTTCCA 
    TGGCTTCCAC CGTCTCCACA TCATCGACTT CGATATCGGC TACGGTGGCC 
    AATGGGCTTC CCTCATGCAA GAGCTTGTTC TCCGCGACAA CGCCGCTCCT 
    CTCTCCCTCA AGATCACCGT TTTCGCTTCT CCGGCGAACC ACGACCAGCT 
    CGAACTTGGC TTCACTCAAG ACAACCTCAA GCACTTCGCC TCTGAGATCA 
    ACATCTCCCT TGACATCCAA GTTTTGAGCT TAGACCTCCT CGGCTCCATC 
    TCGTGGCCTA ACTCGTCGGA GAAAGAAGCT GTCGCCGTTA ACATCTCCGC 
    CGCGTCCTTC TCGCACCTCC CTTTGGTCCT CCGTTTCGTG AAGCATCTAT 
    CTCCGACGAT CATCGTCTGC TCCGACAGAG GATGCGAGAG GACGGATCTG 
    CCCTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 58544 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3930-1 - 3-prime edge 
    ATCCCCACGG GACCAGGGTT GAGCCGCTTT GCCGGCGGAG GTGTATGGTG 
    GTGGTGGCCG TAGAAGATAG CCGCAGGATT CTGTGTGTAG TGGGTTTGAC 
    TTTGGTTGAT CAGAAGACCG GAAACATGTG ACGGCGGAAC AGAGTGGTGG 
    TCTAAACCGA AGCCGGTGTC GACGACTCCG AAACCGGGTG ATGAGTAGTC 
    AGAGTCGTGG AAGGTGGGAG ATGTTTGGAG AATGCTGTTG AGTTCAAGAG 
    AGGGATCTGT GGAATCTCCC ATGATGAGTC CGAGAATGCT CTGTTCGTGG 
    TCATGAGGAA CTTGCTCCTC CCAATCACCC AACCCAATGG CTCCGCATTG 
    CTCATCGGTG GTGGCGTCGC CGCCGCCTCC GACGGCGCTG TTTCCGCCGT 
    GAGAGGAAGA CACCGTGGAG GAAGAGGTTG GGCTTATGAG GGAGTCCAGA 
    ACAGAGGTAG GCTCCGCCGC GGGAACTTCT TCCTCTTCTT CTTCGCCGCC 
    TCTTGCTTTG CGGTGGCTCA AAAGCGGAGA CGACGGTGGT TGGGGGAAGG 
    AAGACGAGAA AGAAGAGAAA CAAGAAATCC CCTTCCCTTG AAACTCTTCA 
    AAGGGTAAGG GCATTGCAGA CGATAAAAAA TAGTGTATTT GTCTTCTTGA 
    AGCTCTTCTT CTTCTTCTTC TTCTTTCGNT GTTGTGATGT GGTGTGGTGA 
    GGTATATTGG ATGCNTGCAA GATATTAAAG TG

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR