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Mutant Lines
54-3686-2

54-3686-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 57043 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -3594; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 156; Region: intergenic

GAGGCAGAAA GCTACTGCTC ATTATTGTGA TTATATGATT ATATAATGGT 
TAGAGTTTGT TGTGGTTTGT GTCTTTGCGA GGGGTCTATT TTTAATTTAT 
AAACATATGT CTCCATGATG TCACATGGGT CTTGTATTAT TTTATTTATT 
TGGACCACAA TACATTTTTG TGTGCGCCGT TTCTAACCTT TTTTTTTCTC 
CGACNAAACA AAGGTTTGCT TTTTCTCCTT TAAATGGTCC ATACNCATTA 
CATATATAAT GCGCCCATTT GCTTTACGCA TTAACTGCAT TTCTCTATAG 
AAATATTTCA NAAACAAACC AAGTGTATAC AATACATCAA CATGTTTTTT 
TTGGGGTTTT AATGTGAANA TTTCATTTCA ATAAAAANAT TACAAGCTAA 
TCTAAGTAAT ACAAACCAAC ATATTTNGGT TTACTCTTTA TATTAAAACA 
TCATTTAGGA TAATTATTTA AAATATATAT TCAAACATCT AAGGTCCTAA 
TTAAGCATTA CAAAAGATTT CCGTTTTANA AACATATCAA GAGTTGATTA 
AATGGANAAA GACGACTAAA ATTTGGGAGT GAAAAATGAC AATATGCCGC 
AAGTTATTGT CTCTTGTGCA ATAAACGTTG GTTGGATACA GACACATTTG 
ATTGAATGTG AATAGTTNAN TTTTGACANA T

3 prime edge [+] show sequence

Chromosome: 4; Position: 57159 [Map]; Strand: c
- AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -3710; Region: intergenic
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 40; Region: intergenic

TCTGCCTCGC ATCAAAATCA ACACCCCATT CATTTTTAAT TAGAAAAATA 
TAGTATTGAG CTAATCCAAG CATTATTCTA TCACGTTATT TAGTCGATCA 
AAAATAATCC CCACAATTAA TATATATTGA ATGTGTTATA CAATAAGTGT 
TTGATAATCA GACAATTAAT TAACTTCTCA CAAAAATTTA TATATTTGTG 
TGAAACTTAA ATTTAAAAAT CCATCGCACT GAGCAAAATA AAATCAGAAA 
CTAAAAATTT GTCATTTAAG ATAAATTGAA TTAAGGAAAA TATTTTTTTA 
ATAATTGAAA CTCCGGTGGA AATCAGGAGG AGCGACATCT CCATGCTGAA 
ACTCCGACGA GTTCTGTCCT TTGCCAACAT AGGAGAAGTG AGTTATGTTT 
CTTCTCGACG TGAAAGCCTC TCACTGGCGT CCGTTGGACT AAACACTCGG 
CTTGAGACTC CGTGAAGTTA CTGTGCGTCA CCGGTGAGAA ACCCATCTGT 
AGAAACATCG CTTGCCACGT CATCATCGGC CTTTCTATCG GACGGCTACG 
ATCCAACACC AGCTTCTCTA TCTCCGGCTG TATAAGAAAC CTCTCGATCT 
TCTGCATTGC GTCGAGGTTG GCGTTGACNG CGTCGAGGGA TTCNAAGAGA 
GCNGTGTGTG AGTGCANCGA GTGGGCGAGC TGTTGANAGA AGGGCAGATC 
CGTCCTCTCG CATTC

AT4G00140.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR