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54-3655-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 60004 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -718; Region: promoter
    Flanking Genome Sequence: 54-3655-1 - 5-prime edge 
    NNGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCAGATCA TATCTCGTTA AGTTAAAACA ACAAAAACAA 
    AACAGATATT TTTGATGTAA CTCCAATATA TACATAGTTT TTTTTTCCAC 
    TTTGTTTAGA TTTATAAATT TAGATTATGT CCGTAGCAAA AAAAAAAAAA 
    AAAANGGGGN CCCCCANTTN NNNNANCCCC CGGNANTGGG GGGNNNCCCC 
    CCCNNAGGGG GGGGGGGNNT GGGGGGGGNN NTTTNNAAAA ANNNNANNAA 
    AANCNCCCCC CCNGGGNCNG NNCCCCCCGG GGNCNTNNNA ANNAAANGGG 
    GGGNAAAAAG GNNNCCCCCC NNNNCNAAAA NNNNNGGGNN TNNNNTAGAA 
    NNTTTNNNAN NNCNNNNGGG GGGGGNNNCC CCNTTTTAAA AAAGGGNNCC 
    CCCCNNNGGG NNNNNCNGGG NNNNNNNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 60058 [Map]; Strand: c
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: -772; Region: promoter
    Flanking Genome Sequence: 54-3655-1 - 3-prime edge 
    CGAATGATCG TCATTATCTG AAACATTCAT GTACTACTTA TAACAAAGAA 
    GGAGTTCTAT ATATATTTAC GTGTATATAA AAACATACTT TCTTTGGTAC 
    ATCTTTTCGT TTGAAGGAAA AAAGTGATTG AAGATCTGTG AATGATGTTT 
    CTTCTGTGAC AAGTTAAATG CACGAGAGAT TGAGAAAGAA CGAGTGGTAG 
    TCCTTTATTG AGCAGACAAT GGAAGTCACC AATCACCATA TATATACATA 
    TATAAATATA TCTACCAATG GAAAACCCTA TAATAAATAA ATGAATAAAG 
    CAATCAGAAA AAACAACAAG AAAGAGAGGT GGGTAATTGA TGAAGACAAA 
    TTAAAATCGG ACCAATTTTG CAATGAATGG CGACAGTTTC ATTATCATGT 
    ATTCATGATA ATGAAAAAGC ATTTACTTTT CTATGCAAAC CAATTCATTA 
    GTATAAACAA TATCAAAGAA AAAAAAAANG TTTAANCANT TTCAAATTNT 
    NAATNTNTNT TTTNTTTNCA ANTTTTNNCC NCCCAAAAAA NCCCANAGTN 
    NAGTTTNTNG TNTAGAAATT TTTAGCCCCA TNTTANAATA CTGGTTAAGN 
    NCCATAAATN TTNGAGNATT ATGGATAGTN AACTNACTTT ATTTAACACC 
    AAAAGGTTAA AANGTNCATT TTAAAAATTA AATNAGTTTA TNTGTNCCC

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR