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54-3649-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 20942 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: -495; Region: promoter
    Flanking Genome Sequence: 54-3649-1 - 5-prime edge 
    CGAAAAACAA ATCAATATTA CACATTATGC ATCTGCAAAT TTTAGCTTTC 
    AACTTTTTGC ATTTTACACT ACAAATTTCA ATATATCTGC TCAACACACT 
    ATGTATTTTG AAATTTAAAT AGTTTACATT TGGTGTTAAA AAAATACATT 
    TATGTGTGAA TAATAGATAA AAAAATAGCA TATATATTAT TCTTAACTTT 
    TGTACGAACA TGGCAACCAC CGTTTTCATA TTTTTGGGAG TGTATATATC 
    ATACTTAACT GTCAAACCAA CTGGTGTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 21058 [Map]; Strand: c
      • AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
        Distance: -379; Region: promoter
    Flanking Genome Sequence: 54-3649-1 - 3-prime edge 
    GTTTTTCGTC AAAACTGAAA AAGAAAAAGT TGAAATTTGA GATGATGTGA 
    TACATATGTC ACATGCATGT GTGTGTGTGT GATAGGTTTA AAAAGAAAGT 
    AAAAGTCAAA TGTTGGTTAA TGCGAGATTC CTTTCACACC AACAAGGCAA 
    ATACATGAGA TGAGATGGTC ACTGTAGCTA AGAGAAATAG AAAAAGAGTA 
    TCGCCGACGC AAAAAAGGCT TGGCCGAGAC AAAAAGGCCC AATTTTACTA 
    CTGTCTAAGA AGAAGAGCAT CGAGAATTTA CAATGGGCTC AAGCCCAGGC 
    CCGTTTTAAA TAGACTCCTA TTGATTGGTT AGCAAGTAAG ACCGGTTCCA 
    ATTTCCGGTT GGGTATTGAG TTGGTTTAAG TTATTAGCCG TTCGTCGTCT 
    TCCTCTGGAG AAAGAAAAAA AGAGAGGAAA CAATGGAAAA TCGCCATCTC 
    CCTTCCAAAT TCTTCTCCTC TGCTTCATCC ATGGCTCAGA ATCAACTTAT 
    CGATTCGCTA ACATCTCACA TATCTTTGTA CCACTCCCAC TCGTCTTCCT 
    CTTCAATGGC TAATACTATC CCCAATCCTA GGTCGGCGAT CCTCCGATGG 
    TTCTCTTCTC TCAGCGTCCA CCAGCGCCTC TCTCACCTCA CCGTCGTTGA 
    TCCCAAGTTC GTCCAAATCC TCCTTCAGAT GCTTGGTTAT ATCCGCA

AT4G00060.1

Model type
Protein coding
Short Description
Nucleotidyltransferase family protein
Computational Description
maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR