Home
Mutant Lines
54-3628-1

54-3628-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 4; Position: 59127 [Map]; Strand: c
- AT4G00150.1 - [+] show detail - GRAS family transcription factor
  Distance: 0; Region: exon1 (5UTR)

AATATACCTC ACCACACCAC ATCACAACAA CGAAGAAGAA GAAGAAGAAG 
AAGAGCTTCA AGAAGACAAA TACACTATTT TTTATCGTCT GCAATGCCCT 
TACCCTTTGA AGAGTTTCAA GGGAAGGGGA TTTCTTGTTT CTCTTCTTTC 
TCGTCTTCCT TCCCCCAACC ACCGTCGTCT CCGCTTTTGA GCCACCGCAA 
AGCAAGAGGC GGCGAAGAAG AAGAGGAAGA AGTTCCCGCG GCGGAGCCTA 
CCTCTGTTCT GGACTCCCTC ATAAGCCCAA CCTCTTCCTC CACGGTGTCT 
TCCTCTCACG GCGGAAACAG CGCCGTCGGA GGCGGCGGCG ACGCCACCAC 
CGATGAGCAA TGCGGAGCCA TTGGGTTGGG TGATTGGGAG GAGCAAGTTC 
CTCATGACCA CGAACAGAGC ATTCTCGGAC TCATCATGGG AGATTCCACA 
GATCCCTCTC TTGAACTCAA CAGCATTCTC CAAACATCTC CCACCTTCCA 
CGACTCTGAC TACTCATCAC CCGGTTTCGG AGTCGTCGAC ACCGGCTTCG 
GTTTAGACCA CCACTCTGTT CCGCCGTCAC ATGTTTCCGG TCTTCTGATC 
AACCAAAGTC AAACCCACTA CACACAGAAT CCTGCGGCTA TCTTCTACGG 
CCACCACCAC CATACACCTN CGNCGGCAAA GCGGCTCAAC CCTGGTCCCG 
TGGGG

3 prime edge [+] show sequence

Chromosome: 4; Position: 40536 [Map]; Strand: w
- AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
  Distance: -347; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAATT 
GCACGTGACG ATCTTGGGCA GCACCTAAAC ATGTATTTGT GTGCGTAATT 
TTGTAATAAG TAAGTGCATC GAGTTTGATG AATCAGTATT TGAATGATAA 
TTCGATGACA GTACATTTGT TGCCATAAGA ACCCTAAAGT AAGATCCATA 
AGGATGATGA AAGCT

AT4G00110.1

Model type: Protein coding
Short Description: UDP-D-glucuronate 4-epimerase 3
Curator Summary: Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description: UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00150.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR