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54-3503-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23315664 [Map]; Strand: w
      • AT3G63095.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3503-1 - 5-prime edge 
    CTNTGANGAA CNAACAAAAT CGGNTATACG ATAACGGTCG GNACGGGATT 
    TTCCCATCCT ACTTTCATCC CACCACCTGC CCCCATTACC CCACCTNCTG 
    CTCCCATCGC TCCCCCGCCT NCTGAACATG ACCACCACGA CCATGACCAC 
    GACCACGACC ACGACGATGA CCACTGATGA TGATGACCAT GACCACGATG 
    ATGACCANGA NNGGCACGCA TGACNANNAT GACGANNCAT GACGACGATG 
    ACCGTGACCG TGACCGTGAC CGTGACCGCG ACCGTGACCG TGACCGCGAT 
    CATGACCGTG GTCACGATGA CCATGACCAT AACCATGACC ATGACAATGA 
    TCACAATGAC AACAATCACG ACCATAATCA TGACGCCGAC CACCACAACA 
    ATGACGACAA CAGCCACGAT CAACACCGCC GTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23315612 [Map]; Strand: w
      • AT3G63095.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3503-1 - 3-prime edge 
    CGGGACAGTG TGCATTGGGA GACGTGAGCA GGCGTAGTTA GCTAGGGCGT 
    ATTGAGACGC GCATAGTGGA CGTGGTGGTG GAATCTGTAT CACTCTCTGG 
    CCTCTTGTGA AAGAGGAGAG AGCGAGAGCC AGAGTTACTT GCAATAAAAA 
    GTGTATCCAT GGAGAGAGTG TGTGTGTGAA GAGATATCTT AGGTGTGTCT 
    CTTTATATAT TCAAAGTCGA GGAAGGCACA AAGAGGGCTG CAGAAGGATT 
    TTAGGTGATA TTGCGTTATC CATTTCATTT GCGTGACCTT GGTGTTAGGT 
    TGTTTGTAGA GCTTTCTTTC AGGAGAGTGT TTCACATTGG TATAACAACA 
    AGTCCTGTTC CAAATTCCAC AACCAATTAA ATGACTAAAA CTACAATTAA 
    TAGCTGCAAC TCCAAATGCG TGACCAAAGA AATGTGATTT AAAACTTGGA 
    TTGATCAAAA GAAAACACAT GAGAAGAAGA TAAAGATTTA AGCGTTAAGC 
    GTTGATTGAT CCTAATCTAC AAGATGATTC CTGCTTTAAG ATCTGTAAAG 
    ATCATATACT CAAACAAGTC TACACAGCAT CTCACAAAAC GAAGAACTGT 
    ATGTGAATAT GTAACATTTA GTCGCTGAAA CCGTTCTAAC TAGAATCAAC 
    TCCCTGAGAT GGAGAAAACA AGTGAATT

AT3G63095.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary
Encodes a Protease inhibitor/seed storage/LTP family protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); Has 80052 Blast hits to 23701 proteins in 1517 species: Archae - 357; Bacteria - 20846; Metazoa - 15827; Fungi - 6834; Plants - 3473; Viruses - 635; Other Eukaryotes - 32080 (source: NCBI BLink).
Link
InterPro Scan - TAIR