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54-3395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100901 [Map]; Strand: c
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3395-1 - 5-prime edge 
    TAGCTTCCTC ACTTCTTCTC CGGTCTTGAG TTTAGACAGA CACACGATGC 
    AGTCAGAGGC TGCGTTGTCG GAGTAGCGGT ACGAGAAGAG GCGATTTAGG 
    TTGAGCTGGT CGGCGAGGAC GCNTGAGGTT TGAAGTAACA ACAACAACGG 
    GGGCAGAAGA AGGGAAGAGG AGAAGAGACC GGACGTGTCT GAAGAAAGTT 
    GCGAGGAGAG CCAGTAGCAT CAGTGGGATC GAATCTGATG ACACGTCGGA 
    GAGCTGACCT TGTAGTCCCA TTGATATGGT TTTAGAGATT GTTTTTGTTT 
    CTTTGGTTCT TGTTGTTGTT CTTGCTGCAT ATACTACCTT GCATCTCATC 
    TCTTTCTTCT TCTTTATATG GATGGAGAAG AAGAAGAAAT GACACAGGCC 
    ACGTGTTGTG GGACCCATTA TTTTGCTTTT TGTTAAGCCC TTTCACTTTC 
    AGTCCTTTTC GTTTTTTCCC ATCTTCATAC TTTTCGCCCC GCTATTTGCA 
    TTTTATGATG AATATGACCC AAAACATTTC ACTTTTCTTT ATTCTCACCC 
    ACATTTTCGG TTTATTGGAA AGAGATACTA AAGTCAAAAT TGAATGACTC 
    TAAAATGTTG TTGGATGCTG ATTTGATATC TCTATCTAAG CTCCTTTCTA 
    TCTNCAAAGA CCAAACAAAA TTTTACAGAG GCCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 100981 [Map]; Strand: c
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3395-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGC 
    AGACACGTCT TCCATAAGCA GTGTTTGGAA GGCTGGCTTC AACATCTCAA 
    CTTCAATTGC CCGCTCTGTA GATCTCCATT GCTACCTCAT CATCATCAGG 
    GACATGGCAG TGATGCGTCG ATCTCAGCCT TCCCTCTTCG CTCTACCTCT 
    ACNTGCATCA TCTCATTGAT TTTTATGTGA AGAAAGAAGA AAGCAAGAGA 
    GAAGAAGATG GAGGGAGGAT GCTTTTTTAT TTATCTTCCT TCTCCTCTTT 
    CCTTTTTAGG AGAAGATTCT TATTTCTTAC TACAGAAGAT TGATTCTTCT 
    TATATATCTA TATATATATA ACCTTCTATA TTTAGCTATG TTTTTGAGGA 
    ATCTCAGATC GGAAGAGAGG TCCTTTTGTT TTTCAGATTT CCACTCTGTA 
    AATTCTTAGT ATGAAAAGAA TCAAATTAAG CT

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR